SimpleSearch - Line and FST details
Line specific information
| Line ID | 371F05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N435585) |
| Segregation Analysis | 50:50:46 |
| Confirmed for Hit | At1g79750 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3639, 3657, 3698 |
Gene hit At1g79750
| Sequence (A. th genome BLAST matches underlined) | >38-K017095-022-371-F05-8409 TATCCTGATATTTCCCGGACTGAAGCCATTTAAATTGAATATATCTCAGAGATCGTATCC ATCCTATCACCCTAAACCTTTTCGCTTATACGAATCAGGCAGCCGTCCAAACCTCTCTCT TTGACGAAAAAATATATTATCTGATATCTCGCCGAATGGAGAGGGATATCATCACCTTCT CATATCGTTCCTCCCTCAGTTCCTCTCCCATAGCTTCTGATGCTGCCAAAAGCATGTCAT CACGGACACTGATCGTCCCTGACATTATTAGCCCGAGTCCAAACCCTTGGAAAATGTATG CGTTGTATTGCCTGTCCACATAAACCTCAGAATCAACTCTCTTAAATTACTTGTCAAAAC CTATTCTACAGCTGCGGTCACAACCTGTCCAGGCACAAACGCCTTTCCCTCATACTCTAC TGAGACATATGGTCTTCGACTTGCAAAGATCGCCCGTCCCTGTAAAACTAGTTTGACTTT GTAAAGTCAACGACAATACTCCACTTCTCTCTGATCATGAAAAATCACAATCTTAACTCG TTTACCTGACTCCACGTATAGGCCTCTTCTGCCGTACATTCTGACTGAGAAGTTGGGTTC GAAAGAGAAAGAATGATGGGTTTCTGTATGCACCAAATTTGACTTTATGGTCATGACTAT GCGCTCCTA |
| GenBank Accession | BX003388 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:30007837 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F20B17 |
| Hit Gene Code | At1g79750 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NADP-malic enzyme 4 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g19680
| Sequence (A. th genome BLAST matches underlined) | >38-K017074-022-371-F05-8409 CTCCCTACTATTGAGATATACATAAAGATCGTATCCATCCTATAACCCTAAATCTTTTTG CTTATTCGAATCTGTTAGCCATCCAAAACCTCTCTCTTTGCCGCAAAAAATGACTATGGG ATCCTGCCTATAGGGGAGCACAGGCAAAATGTATGGCTTGCTTACAATCACCGATTCATT CGTCTTTTATTTCGTTTAATATTCAGATATTTTGGTCTAAAATTCTTCTTCGCTCTTTTG GATTTTGGATTTTAAGGATTTATAGGTTGATTATTTATGTGTTAGAGTCTCAAATCGAAT TTGAAATCTCTTCACTGCGATAATGCTTTTTAGGTTATGAATTGCTTAATTTTTCCATAA TTCGGATTCCCTCGATTTGCTAGTCGGGAATTGAGGGCTATAGGATCCTCCCTATATGGA GACGCAGCTTTACGGTCGACTTCAGTTACGTCCGCTATTTGAATCTATAACTCCATGGGA ATTGGGGATCCGATATGGGATCTT |
| GenBank Accession | BX003387 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:8501257 - go to primer design |
| BLAST e Value | 4e-93 |
| Hit Clone Code (BAC ID) | F6F22 |
| Hit Gene Code | At2g19680 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Mitochondrial ATP synthase subunit G protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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