SimpleSearch - Line and FST details


Line specific information

 
Line ID 373G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N435787)
Segregation Analysis 50:49:37
Confirmed for Hit At3g01520 At4g30100
Parent of DUPLO pair 12396
Parent of pair(s) none

Gene hit At3g01520

 
Sequence (A. th genome BLAST matches underlined) 
>23-K017165-022-373-G03-8409
TGAGCATTTTCNATTGATATAGTCTCTTTCTTTCTTTTTATAAGTGATTAGCGTCACTTT
TTTTTTTATATAACATAGCCTCGGTCTAGGGGATCTTCCCCAAAGGGAGAGACTGCCCAA
GGATCCTGCGTGGCAGAGCACCTGGATAGGAAGGCCCAGCGCTTTACATACTCTTTTGGA
TCTTATCACCTTATCGTATAGATAGGCGAGGAGGGGGTGCCTCTTGGGTCGCTTCTCTTA
TCATGGCGATCCCTGCTGTGTGGCTCTGCTCCTGCCCCGACTTGAACTATATCGAGATGA
CTCAAACTTGTAGGCAAGATCAACAATCCTACCTATC
GenBank Accession BX003642 [GenBank]
Graphic View Graphic view of gene At3g01520
Predicted Position of Insertion Chr3:209914 - go to primer design
BLAST e Value 2e-09
Hit Clone Code (BAC ID) F4P13
Hit Gene Code At3g01520 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Adenine nucleotide alpha hydrolases-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g30100

 
Sequence (A. th genome BLAST matches underlined) 
>23-K017159-022-373-G03-8409
TTTCTTTCTTTTTATAAGTGATTAGCGTCGCTTTTTTTTTATATATAACGTGATCCCGCC
CTGTGGATATCCTCCCTATACTGAGAGATACTCCGATGAGAGTGTGTGAAGAAGACCTTG
TTTGGTTGTTTTTGCGATTTACATACTCTTTTGACGCTAATCTCTATATCGTATTTATAG
GCGAAGAGGAGGTGAAGTTTGGTTCGCTTCTATTATTATTGCGACTAAAACTATGGGATT
CTCTCTATGCCGCGACTTGAACTAAATCTATTTAACTCAAACTTGTGTCAAGATCAAGAA
TCCTACCTATCTGTAATCCTTTATAGCAGTTAAAGTCTGATTGCTATTCATCATTCAGTC
TAATAACTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX003641 [GenBank]
Graphic View Graphic view of gene At4g30100
Predicted Position of Insertion Chr4:14713565 - go to primer design
BLAST e Value 8e-64
Hit Clone Code (BAC ID) F6G3
Hit Gene Code At4g30100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences


Last Updated on 10.06.2021 13:37