SimpleSearch - Line and FST details


Line specific information

 
Line ID 378C04
Vector Used pAC161
Line Availability available as T3 set from NASC (N436220)
Segregation Analysis 50:47:43
Confirmed for Hit At3g05850
Parent of DUPLO pair none
Parent of pair(s) 4985, 4987, 4993, 5165, 5189, 8609, 96187

Gene hit At3g05850

 
Sequence (A. th genome BLAST matches underlined) 
>27-K017230-022-378-C04-8409
ACTAAAGATTGAAGTAAAGCTGGTTTATAGCTTTACTCACGATATCGCAGAAATGAAACC
GTAGAAAGTACTGAAAACCCGGGTCAACATCGAAATCCCAAGTCACATTGAAGTTGCTAT
GGGATCTCNCCTATAGTGAGAATGTTTAATTGCGATGTCAGGACAGTTTCTCTAAAATAC
TTTCTCCCGGATAACAAGAAAACGCTCATCTCCATATCTAACGATAAAGATTTGAAACGG
ATGATCAAATTTCATGAGAACTCCAACACTGCTGATGTCTATCTCTTACCCGAAGAAGCT
ACTCCCGACATTTCAAACATGCCAGCTATGGGATCCTCCCTTATAGTGAGATACTCACGG
AAACCACAATCATCATCAAATTGCAATACATAAAGGGTAAGATTGAATTCAAAAAGGGAG
GTAATCTCTATGGGATCCTCCCTTATAGTGAG
GenBank Accession BX004204 [GenBank]
Graphic View Graphic view of gene At3g05850
Predicted Position of Insertion Chr3:1745890 - go to primer design
BLAST e Value 2e-101
Hit Clone Code (BAC ID) F10A16
Hit Gene Code At3g05850 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MuDR family transposase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37