SimpleSearch - Line and FST details


Line specific information

 
Line ID 379C12
Vector Used pAC161
Line Availability available as T3 set from NASC (N436324)
Segregation Analysis 50:49:46
Confirmed for Hit At3g03530
Parent of DUPLO pair none
Parent of pair(s) 56563, 91365, 91366, 91367, 91368

Gene hit F10A12

 
Sequence (A. th genome BLAST matches underlined) 
>91-K026824-022-379-C12-8409
CTTCCCATAATAAAACCAAGACAGAAAGAGACCAGTTATGCAATATTTGTTTTCTTGTAT
CATGTAGTATGTATGATTGTTANGATTCTTTACTTTGATCCTCAATGTTTCTAAAGTTTA
CAAGTAATGAAATACCACAGGTGTGGGATCCTCCCTATANTGAGACCTATATCNCCCTAC
CCTCGANAAGACCCTTCTATTCATATGGGAAAGATAGGACCGCATGTATAGCATGCTCCC
CAAAGCAGACCAATGCCACAGCGCACAGCAGTTGAAAACCTAAGAGAAAGATCCAGGCCC
AAAAAGGCCGCGATAGAGACTGGCACCGACGAGACCGGGTAGGTAGAGACCATCCGAAAG
GGGGGAGCCGGAGAAAAGAATTTCTTTTTCCCCCCCCCCCAATAAACAGATAGACTCCTC
ACCACAAAAAGAAGAGAATCTCT
GenBank Accession CR396830 [GenBank]
Graphic View Graphic view of sequence CR396830 of line 379C12
Predicted Position of Insertion Chr2:11755081 - go to primer design
BLAST e Value 6e-54
Hit Clone Code (BAC ID) F10A12
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g03530

 
Sequence (A. th genome BLAST matches underlined) 
>91-K017221-022-379-C12-8409
TGATCTGANATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGAATGGAGTGAC
CTGGATCCGGGTTAACGTACTGAGACTGATCCCCGAAGACTACACGAAGAGAGTTTGTGT
CGGATGACGAAACCGTGTTGGATTTGGGATCAGATTTCGTGACGCCGTCGATTTCCCGGT
TTAGTTCTTTAAACCAGCCTATGGGATCTCCCCTATAGTGAGACAATTGATTCNTTGGTT
ACATTTCCATGTTTATGTACTATGGAATGACTTCTTCACCACTATGGGATCCTCCCTATA
GTGAG
GenBank Accession BX004336 [GenBank]
Graphic View Graphic view of gene At3g03530
Predicted Position of Insertion Chr3:844720 - go to primer design
BLAST e Value 3e-85
Hit Clone Code (BAC ID) T12J13
Hit Gene Code At3g03530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation non-specific phospholipase C4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR809176 [GenBank]


Last Updated on 10.06.2021 13:37