SimpleSearch - Line and FST details
Line specific information
| Line ID | 383F01 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3397, 3553, 3677 |
| Note |
Gene hit At5g48110
| Sequence (A. th genome BLAST matches underlined) | >06-K017270-022-383-F01-8409 AGTGGCTCTACAACGATCGGACAGGAACCACTTGTCATNCGTCAGCGTCTTCGATCTATG GGATCCTCCCCTATAGTGAGATCCATATACCTATTCTTTCGTTTATATAACTTACAAAAT CTGGTATGAAATGATAATTAGGATGAAATGGCTATGGGATCCTCCCTATAGTGAGANNTN NNNNTNTNNNCNTNNGCTTTGTTGTCCTCCTCTCTCCTGTACTGGCCCCCTCCCTATTTT GCGATNTCTCTGGTTGGTCTTCTCCTTTTGGGGGACTTAATCATAAAATCGTTCCAATGA TTTTGCATATCTTGCGACCATCAATGAGTGGCAGCTAGATGTAAAAGGATTTAACGAGTT |
| GenBank Accession | BX285541 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:19501677 - go to primer design |
| BLAST e Value | 3e-32 |
| Hit Clone Code (BAC ID) | MDN11 |
| Hit Gene Code | At5g48110 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 365F01 |
Gene hit T25K16
| Sequence (A. th genome BLAST matches underlined) | >06-K017266-022-383-F01-8409 CTATTTAATTGTCCGAAAAATACGACATCCTCTTGTTTTATCTATCTTACATTATTTTAT GGGTTTTTGTTTGTGTTCTTTACTTCATGAAAAATAAAATAAAAAAATGTCTAAACCTAT GGGATCTCCCCTATAGTGAG |
| GenBank Accession | BX285540 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:20916 - go to primer design |
| BLAST e Value | 2e-30 |
| Hit Clone Code (BAC ID) | T25K16 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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