SimpleSearch - Line and FST details


Line specific information

 
Line ID 383G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N436750)
Segregation Analysis 50:50:31
Confirmed for Hit At5g05950
Parent of DUPLO pair none
Parent of pair(s) 11683

Gene hit At5g05950

 
Sequence (A. th genome BLAST matches underlined) 
>47-K017270-022-383-G06-8409
TACTTGATTATAAATGAGTGTATAGCCTTCTCTGGGATCCTCCCTATAGAGAGACTTGGA
ACCCTACCGATCATTAGCAACGACCTGCGGAAGCGACCATATTTGCGTATCCACAGATAC
GAATGGTTGATAATCTCGTCGCCTTACCATGAGAACTCGTTCGCATCATTCCTATTCTCA
AGTCTCATCGCTCTATGGGATCCTCGCCTATAGTGAGACTTACATAATTCACTCAAATGC
TATGGGATCCTCCCTATAGTGAGAGGATCCTCCCTATAATAGAGAAGCGCTAACATCCGT
GATGGGTACATCCGGTTCGGCATCGGNTAGTGGATGTTGGTTTCCCATGGTGACTTTGAT
GAATGCCGTGCATATCACGCTTGGGACTGTGGGCTGCGGTGCCATGGGATCCTCCCTCTA
CCGAGACCCTCCAGNACCCGCCTCCGGCAATCGACCTCGATGGCATCAATCACTAAGGGC
CCCACCAGGGCCTGCGGTGGGTGGCGACCCACTTTTAAACCCCCGTACACGGGGCCTGGA
CAAACACTCGCCCAAAGATGTCCCCCCCAGCTGCAAAAGAGGAAAGCTGACGGGTACCCG
TAAAATTGACCAACAAATTCGAGAAAACCGCCGAGAGAAAGGCCGCCCCCCCCGGGAAAT
CGTGTCGCGAACGCCAGCCAGAACGCAGAACCCGAGGTTGAAGGACGACACGGCGACGCC
CCGCCGGGGCCGGGGGCGGTGGATGGCGCTGCCACCCGGCGACACCGTACGGGCAGGACC
CCACCTGGAACAAGGCCCCCCCGCAGTTAAGGCGGGGCGGGCGGCGCCNCAAAACTTGAA
CACAGAAGCACCGCGCTATCGAGAAAGGAAATGGA
GenBank Accession BX285566 [GenBank]
Graphic View Graphic view of gene At5g05950
Predicted Position of Insertion Chr5:1788870 - go to primer design
BLAST e Value 1e-16
Hit Clone Code (BAC ID) K18J17
Hit Gene Code At5g05950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation maternal effect embryo arrest 60
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX285566 [GenBank]


Last Updated on 10.06.2021 13:37