SimpleSearch - Line and FST details


Line specific information

 
Line ID 384E01
Vector Used pAC161
Line Availability available as T3 set from NASC (N436817)
Segregation Analysis 50:48:40
Confirmed for Hit At5g61770
Parent of DUPLO pair none
Parent of pair(s) 92039, 92051, 92052

Gene hit At3g01870

 
Sequence (A. th genome BLAST matches underlined) 
>05-K017271-022-384-E01-8409
TGATCTGTAGATTCCCGGACTGAAGCCATTTACACCCGAAACAAGCGTAGAATAACATTG
TGGCCGGCATGTGCCTGGATGCGCCACGGATGGCTAACTCTTATATGACAAGAGAACATA
ACTGTCAAAGGCTTTTCCAATAGATGAATGCATTCTACTCTTTCTTTAGTTAACAATAGA
TTGCAACATTTAGGATTTAGGTGTGTGTAACCTTCAACCTCTATGTTCCCCCATATAGGT
ACTATTATAGCTTTAAGTTTTTTAGTCAAAGAGTGTTTTAGTAAGGTATATGTAAAATGG
GAATTGATTAAATTCAGTCAGAAATATTTATAGATGTTTTAAATTTGTCCGTTTATAATG
GTAACCATCTAATTATAGCACCAAATTTTCAAAGGGATAGTTTACGATCATTTACAATCA
GCAAGGGGTTAGTTTGACTATTTTTTGTTGAATACATTACATGTTTATAGAATACAATTG
ATTTTTTACAAATATAAGTTTTCAATATCTGACTTTTATTAATACATTAAGTGACTCCAT
GCATGAATCTTAATTAGCTATGGATCCCCCCCCATAAAGTTAAGAGCAAANATCTGCTAG
GGCCTCTATTTGAATTTTTTGAACTCATGGGAAATTGGGGATCCTCTA
GenBank Accession BX285654 [GenBank]
Graphic View Graphic view of gene At3g01870
Predicted Position of Insertion Chr3:305370 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F28J7
Hit Gene Code At3g01870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein (DUF946)
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g61770

 
Sequence (A. th genome BLAST matches underlined) 
>05-K017267-022-384-E01-8409
GAGCATTTACATCTGAGCATTCTTGGTCCATTTCTTGCAGTTTCACTGCGCTCTTGGTGC
ACCTTTGTTACTCGGCCTATGGGATCTTCTTATAGTGAG
GenBank Accession BX285653 [GenBank]
Graphic View Graphic view of gene At5g61770
Predicted Position of Insertion Chr5:24817215 - go to primer design
BLAST e Value 3e-14
Hit Clone Code (BAC ID) MAC9
Hit Gene Code At5g61770 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation PETER PAN-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37