SimpleSearch - Line and FST details


Line specific information

 
Line ID 384G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N436842)
Segregation Analysis 50:49:47
Confirmed for Hit At5g06150
Parent of DUPLO pair none
Parent of pair(s) 96640, 96641

Gene hit At5g06150

 
Sequence (A. th genome BLAST matches underlined) 
>15-K017267-022-384-G02-8409
TGATCTGTNATTTCCCGGACATGAAGCCATTTACATTGAATTAATTGCATGCATGTCGAC
CCTATGGGATCCTCCCTATAGTGAGAAAGACGCGAAGAACAAACCTCTGACTTGTTCAGG
TACGTTTGCTCTCGTCGCCATGATCGCTCTCCCAATGATTCTTACTCTTCTTGTTTCTTA
GTCTTGATATTTCTCTTTCGTAAAGAGTCTCTGCGATTGTGACGAAGATTGGAAGCGAGC
GCTGCTTATGAAGAGGAGGAGGAGCCAACGGTTCAATTCCAACGGTCATATTTTTGGGGA
TTTCATCTGTTGCCGTTAGATGATTAAATTTTAGATCTAACGGTGGATAGGTTAGTCTTC
GAAGTTGGAATGCGCTGGCACTGGATAATTTTACACTATGGGATCCTCCCTTAATAGTGA
G
GenBank Accession BX285687 [GenBank]
Graphic View Graphic view of gene At5g06150
Predicted Position of Insertion Chr5:1861488 - go to primer design
BLAST e Value 1e-176
Hit Clone Code (BAC ID) K16F4
Hit Gene Code At5g06150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cyclin family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g01913

 
Sequence (A. th genome BLAST matches underlined) 
>15-K017271-022-384-G02-8409
TGCAAAAGGTTTCACTGTCTGATCAGAGGCAGTTGGTGCAGAAATAGCATGAATTGACAG
ATGATGTGGTGGAACAGTGCTATGGGACTCTCCTATAGTGAGANNNNNACNNNNAANGNT
ACAACNATTTCTTCACTANATCTCATGATCATGACTATACCTCCTCTCCAATATCCAACG
TCACTTTCTACCTAGTTCTTCAACAACTTCAAGAATTCAAATCCTAACAAAATATCAAAT
CTCTTTGATATGTTTATGTTGGGGTAATGTATTAGTTCTATATATTACCAAAGTTTCAGT
ATACTTGATATTTATATTGATATTCTTTGATAACCGGTCCACTCATATTCCGTTAACAGC
TTAAAAAATGTTATAATTTCTACTTTTCTATGGGATCCTCCCCAATAGGCCACACGGAGA
CATCNGAAATCTTTTATCTGTTTCCGGAGCTCAAGGAGGAAAGGCTCAACCTCCCATTAA
TCCACCCATTACTCCAAATTTCCGAGCCCAGTTATTAACCAATGCCCCACTTCAAAAGAA
AACCCATCAATGGA
GenBank Accession BX285688 [GenBank]
Graphic View Graphic view of gene At2g01913
Predicted Position of Insertion Chr2:422179 - go to primer design
BLAST e Value 1e-80
Hit Clone Code (BAC ID) T23K3
Hit Gene Code At2g01913 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37