SimpleSearch - Line and FST details
Line specific information
| Line ID | 387B07 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N437075) |
| Segregation Analysis | 50:50:50 |
| Confirmed for Hit | At2g41830 |
| Parent of DUPLO pair | 12450 |
| Parent of pair(s) | none |
Gene hit At2g41830
| Sequence (A. th genome BLAST matches underlined) | >50-K018254-022-387-B07-8409 TGATCTGAGATTTCCCGGACATGAAGCCATTTACATTGAATATATTTAGAGAGTGAAGGT GGGACATGAAGCCATTTACAAGGTGTTCTAATTCTTGATTTGTAACTATGATCCATTTTT CATGGATTATTATGAAATTCTTTTACCTCAAAAGTGGACTTGTTTCTTTTTCGCTTGTTG TTGAGATTGCTCCCATTCTTTATGTTGCTAATGAGCTTGAATCTAGTAACGCTATGGGAT CCTCNCCTATAGTGAGATCCAGCAAATACACCATACCATTATTATGTATTTGCTAACACC TACAGTCTCGTATTGTTGTTCTCTCGGGTTACGGTAACATATTCATACCTCAATATCTCT GCATCTGACTGTTTCTTATAGTTTTTATGATCTATGAGCTAAGTCTCACTATATCTCCGT ATGAATGATTTGCTTCCCACTTTATGTGAGACATTCACAAAATTTGAATCTTTCAGAACT CAAGTCATGACGCTTTGAATTCGAAGTTTCCAAATGGCACTTTCTTTGCGAGATATTTCA TTGATGGAAGGAGGTGAGCTTCCACATGTTTTGATTCCTCCCTGCTATGGGATCCCCCCA AATAGGGAGACAACGGGGACCCGCATGGGGAACCCTCCGCGCCACAAGAAACCAAACCCG CCGGTGAAAAAGTGAACTCAGAAAACAGCCGCTCAGTCCGAAGCGCATTAAAATAAGCCC AGCCCGCTAGTGCGCCCGAACGAGGACCCAAAACCGCCGCAGGGAGGAAGAAAGGAGCAG AAAAAAGCGTGAGAAGGAACAAAA |
| GenBank Accession | BX285979 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:17452688 - go to primer design |
| BLAST e Value | 8e-144 |
| Hit Clone Code (BAC ID) | T11A7 |
| Hit Gene Code | At2g41830 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Uncharacterized protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T19L5
| Sequence (A. th genome BLAST matches underlined) | >50-K018250-022-387-B07-8409 TCTTTTTTCATGGAATATTATCTAAATTCTATTACCGCACTAGGGACTGGATTCGTATTC GCTCGTTTCCCAGATTGCTACCCTCNCTTTATGTTAGCTTATGAGCTTGAATCTAGTAAC GCTAGGTTGACTTATTGGTATAAGTTTTTCTATAAACTCTTTTCTAACATTTTTTATTAT TTTGATATTTAATTTGTTGTTTATCTGTCAATATAAAAAATACTTACATCGACGATAAAA AAAAAGTTTACTTAGGCAATACTCATTAGTACAATTTGCACACATTCAATCACGTCATCT TTCATAATATTGATATTATCCTATGATACAAAAACATAAGAGAACATTAGTAACTCTTCT AACACTAAATATATCACATCAATGTTCAAAAATGAAAGCTCAACAAGATAAATAGTCTAA TTGAAATAAAATTTTATGGTCCCTGGTTAGGGGATGTATAGCCAAT |
| GenBank Accession | BX285978 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:4142286 - go to primer design |
| BLAST e Value | 2e-116 |
| Hit Clone Code (BAC ID) | T19L5 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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