SimpleSearch - Line and FST details


Line specific information

 
Line ID 390F08
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair 12419
Parent of pair(s) none
Note

Gene hit At5g51450

 
Sequence (A. th genome BLAST matches underlined) 
>62-K018262-022-390-F08-8409
TGATCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGCGGGTAAAC
CTAAGAGAAAAGAGCGTTTATTAGAATAATCGGATATTTAAAAGGGCGTGAAAAGGTTTA
TCCGTTCGTCCATTTGTATGTGCATGCCAACCACAGGGTTCCCCTCGGGAGTGCTTGGCA
TTCCGTGCGATAATGACTTCTGTTCAACCACCCAAACGTCGGAGAGCCTGACGACGGAGC
AGCATTCCAAAAAGATCCCTTGGCTCGTCTGGGTCGCCTATGGGATCCTCCCTATAGTGA
GAGCGCTAATGCGGNACTGTGAAAAATGTTAATCATAATGATATATTGACTCTGGCAGGT
TGGTTCTATGTTTAAATGAGGT
GenBank Accession FR809397 [GenBank]
Graphic View Graphic view of gene At5g51450
Predicted Position of Insertion Chr5:20896007 - go to primer design
BLAST e Value 4e-13
Hit Clone Code (BAC ID) MFG13
Hit Gene Code At5g51450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RPM1 interacting protein 3
Insertion Classification CDSi
Confirmation Status failed

Gene hit At3g04930

 
Sequence (A. th genome BLAST matches underlined) 
>62-K017793-022-390-F08-8409
ATGGACCTCTATTTAGTCTCCATATGGGATCCTCCCTATAGTGAGATTAATTACATACGG
CTTAGGTTGGCTTGTTTGTATGCTTTGTCCTATGGGATCCTCCCTATAGGGAGATCCCAT
GTGGACGCGAATGTAGACACTATGGGAACCCCCCTAAAGAGAGAAGACCAAGAACCCAAA
AATCTCATAGCCTGACGACAGATCAGCATTCCCAAAAGATCCCTTG
GenBank Accession BX286426 [GenBank]
Graphic View Graphic view of gene At3g04930
Predicted Position of Insertion Chr3:1362597 - go to primer design
BLAST e Value 2e-08
Hit Clone Code (BAC ID) T9J14
Hit Gene Code At3g04930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DNA-binding storekeeper protein-related transcriptional regulator
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37