SimpleSearch - Line and FST details
Line specific information
| Line ID | 396F12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N437992) |
| Segregation Analysis | 50:49:48 |
| Confirmed for Hit | At5g15730 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2652 |
Gene hit At5g15730
| Sequence (A. th genome BLAST matches underlined) | >08-K118237-0022-396-F12C-8409 ATTGAATAATCCTGGATTTCCGTGAACTATTTTTGTATAGGTCGCGGATTTCGGGTTGTC GAAAGAGATGGTTTTAGATAGAATGACTTCCGGATTGAAGGGTACTCACGGCTACATGGA TCCAACATACATTTCGACTAACAAATACACGATGAAGAGCGACATTTACAGTTTCGGTGT CATCATTCTTGAGCTCATTACTGCAATCCATCCCCAACAGAATCTGATGGAATACATCAA CCTGGTAAGTTAAAATCCCTGGTCTATGCAACCAAACCGAATAACCCAAAAATCTGAAAT TAAAACCCAAATCGAACCAAAACTCAGTGAGTGATTGTGAGATCAATGATTCTGTTTTTC TGATGATCAGGCTTCGATGAGTCCAGATGGTATCGACGAAATACTCGATCAGAAACTAGT GGGAAACGCAAGCATTGAAGAAGTGAGGTTACTGGCGAAGATTGCAAACAGGTGTGTGCA TAAGACACCAAGAAAAAGACCATCTATTGGAGAAGTAACACAGTTCATACTAAAGATCAA ACAAAGTCGGTCTCGAGGAAGAAGACAGGACACGATGTCTTCATCGTTTGGTGTTGGTTA TGAGGAAGATCTGTCAAGGGTTATGAGCAGGATTAAGGATCAGCATGTTGAGTTAGGGTT ATT |
| GenBank Accession | HG968954 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:5132366 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F14F8 |
| Hit Gene Code | At5g15730 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Protein kinase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX287071 [GenBank] HG968954 [GenBank] |
Gene hit At1g41630
| Sequence (A. th genome BLAST matches underlined) | >94-K018299-022-396-F12-8409 ACCAATTTATAGCCGCCGGCGAATTGATCGGTAAAAAAAAAAATTTCCGAGGTTTCTACA AAGTTGGAAATCAGGATCTACCTCTTTTTGGGATCCTCCCTATAGGGAGAGTCAAAGATG GGGAGATTGAAATCAATCTTGGAATGGATACCCGGTTACTGATTGACATCAAGAAAACTC CAAGAAGATAAGGGGGGATGGACAAAAATTTGGGGTCCAAGGAGTGTTTACTGAACAAAG ATTTGAAACTGTAAGAGTAGAGGAACCGAGTTTAGCTCCAACACGACCTTCAAGCTCAAC CAGTCTTTTTAGTACGCTCTCTATAGCTGATTGGCTA |
| GenBank Accession | BX287073 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:15473586 - go to primer design |
| BLAST e Value | 3e-54 |
| Hit Clone Code (BAC ID) | T5F23 |
| Hit Gene Code | At1g41630 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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