SimpleSearch - Line and FST details


Line specific information

 
Line ID 397A01
Vector Used pAC161
Line Availability available as T3 set from NASC (N438017)
Segregation Analysis 50:48:46
Confirmed for Hit At3g62400
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g62400

 
Sequence (A. th genome BLAST matches underlined) 
>01-K017930-022-397-A01-8409
TATCTGAAATTTCCCGGACATGAAGCCTTTACATTGATATATCCTGGACCATGAATACGT
GCATCGCAATGATCGCCGACTTGCACTGCTGATGACGCAGTGGATACACTGATGATATAC
ATTCAACCTATGTCTCTGCCACCTAACAGATACTATCTCATGTTCTCGTCTTAGGTAAGA
GCGCGCGTCCTATATCTGGGCTCCTCACTGTCATCTGAACTATCTCCGATAACTAAGACT
ATATTCACAGGCTGCCGTGTAGCTTCTCCATCTGAAAATGACAGATATGCCTACTGATCC
TATCTTTGCAAGCCACCGCTGTCTATCTCACCTCCGAGAATCGATCATATAGACTCGCCG
GGCCTGCTCTCTAGAACGAGTCGTGGAATCTTGGGTCAAGAACAACTAACCGGATGATGA
AACTTCAGCCGATTAAAGCAGCACCGGAAGGAGGGATATCGGACGTAGTGGAGAAAAGCA
TTAAGGAAGCTCAGGAGACTTGTGCGGGCGATCCTGTGAGTGGAGAGTGTGTAGCTGCGT
GGGACGAGGTTGAAGAACTTANCGCAGCAGCTATGGGATC
GenBank Accession BX287111 [GenBank]
Graphic View Graphic view of gene At3g62400
Predicted Position of Insertion Chr3:23090786 - go to primer design
BLAST e Value 3e-103
Hit Clone Code (BAC ID) T12C14
Hit Gene Code At3g62400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome C oxidase subunit
Insertion Classification 3' region
Confirmation Status confirmed, show confirmation sequences
Other FSTs Supporting this Hit BX287111 [GenBank]


Last Updated on 10.06.2021 13:37