SimpleSearch - Line and FST details


Line specific information

 
Line ID 398H12
Vector Used pAC161
Line Availability available as T3 set from NASC (N438208)
Segregation Analysis 50:38:27
Confirmed for Hit At5g11480
Parent of DUPLO pair 1857
Parent of pair(s) none

Gene hit At5g11480

 
Sequence (A. th genome BLAST matches underlined) 
>09-K118836-0022-398-H12C-8409
ACATATTCGACCCTTAAGTATCCTCGTCGTTAACTCGCCGAGTCTTCACCGGATATATCG
GTCTCCGGCGGAATAAAAAGCTTGTCGAGCGCAATCTCGACAGGTGCATCATCCAAATCG
GTTGAATCTGAGACCGATAATGGTATGGGTTCAACAGTGGCGAGATTCGATTTAGACGCG
AATGAGAAAAGGGTTCGAGATACTGTTACCGAAGGCTTAGGGTTTAAGAAACTGAAATGC
GAAGAAGAGAGAGAGAAAGAAGGTTTCGCGAGGATTGAGAGATGGAATCTTGGAAGATGC
GCTAAAATCATATCTGATCGATTCTCTTCTAAGTAATAGTCTTATGAGCTTTTTAGTTCT
CTTTAGATTCTGTGAGCAGCCATGGATGTAGGACTGAACTTACGGATGCGGAGGAGGTCG
GGGAAACAATATCCACATCAAAACGCTACGTTTTGATGGTGGTAATCTGGACGATGAACT
TTCCTTATATTACAATTTGCCCGCTCTATTTTAACGATTGTATCATTTCGCCACTATCTT
CTAATTAGAGAGTAAATGGGTAAATTAGAAAGAAAACAAAAAGTATAAGGAGTATATAGC
AAAATCGGGTCGTTGGCATCTCCTTCCACCTCTCCAAGCACGGACGAGACTTCGACCAGT
GAATCCAAATCTCTCT
GenBank Accession HG968955 [GenBank]
Graphic View Graphic view of gene At5g11480
Predicted Position of Insertion Chr5:3671161 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F15N18
Hit Gene Code At5g11480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR809573 [GenBank] HG968955 [GenBank]


Last Updated on 10.06.2021 13:37