SimpleSearch - Line and FST details


Line specific information

 
Line ID 399A12
Vector Used pAC161
Line Availability available as T3 set from NASC (N438220)
Segregation Analysis 100:99:90
Confirmed for Hit At5g49630
Parent of DUPLO pair none
Parent of pair(s) 5047, 5111, 5115, 5192, 5196, 5209, 11304

Gene hit At5g49630

 
Sequence (A. th genome BLAST matches underlined) 
>89-K017932-022-399-A12-8409
GGACATGTAGATTTCTTTTTCTTTTGCGTCTTTTATTAATGTTTCACGCGTGCGTCTATG
GGATACCTCCCTATAGTGAGATTCTCTGCTATGGGATCCTCCCTATAGTGAGACATTCAA
AAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACTTTTTGATAAAACGACAAAT
TACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTT
TATTTCGACGGGTCTACATTCACGTCCAAATGGGGGCTTAGATGAGAAACTTCACGAGCG
ATGCCTTGATTTCGCCATTCC
GenBank Accession FR809575 [GenBank]
Graphic View Graphic view of gene At5g49630
Predicted Position of Insertion Chr5:20146125 - go to primer design
BLAST e Value 2e-06
Hit Clone Code (BAC ID) K6M13
Hit Gene Code At5g49630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation amino acid permease 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37