SimpleSearch - Line and FST details
Line specific information
| Line ID | 402B10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N438518) |
| Segregation Analysis | 50:48:46 |
| Confirmed for Hit | At1g70710 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5437, 5631, 5633, 5679, 5695, 5719, 11362, 91135, 91189, 91206, 91215, 91231, 91238, 91240 |
Gene hit At1g70710
| Sequence (A. th genome BLAST matches underlined) | >74-K017863-022-402-B10-8409 TGTCCTGAAATTTCCCGGACATGAAGCCATTTACAATTGATAAGCAGCAATCACCATCTC GGAAACCCTCGCGAAATTGCTCATGACAATTGCTCATTCCAGACTTCTACTTGACCGTGC CGCTATGGGATCCTCCCTATAGTGAGAAATAACTCTCACCATTTCTTCCACTTTATTTCC GTTAACTATGGATTTTTTGCTTTGAGAAATAAAACGTCGCTATTTTGATTTTTTGTTTTT TTAATTAAAGAGTAAAAAGGACAAGTAAGGTTGACAAATTAAAAACAAAAAAAAGGACCA CACATGCTTGGCTACGAGTCTATGGGATCCTCCCTATGGTGAGAAAAATGAAAAATTATC CTTTCGATGCTTTTTTTTCTCCAATACGGAAAATGNNCACAANGATATTATAAAATGAAA GTACATTTTGATAAAACGACAAATTACGATCCGGCGAATTTATAGGCGAAAGCAATAAAC AAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACATTCACGTCCAAATGGGGG CTTAGATGAGAAAATTCTCGATCGATGCCTTGATTTC |
| GenBank Accession | BX287514 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:26662301 - go to primer design |
| BLAST e Value | 6e-06 |
| Hit Clone Code (BAC ID) | F5A18 |
| Hit Gene Code | At1g70710 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | glycosyl hydrolase 9B1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit K21H1
| Sequence (A. th genome BLAST matches underlined) | >74-K017863-022-402-B10-8409 TGTCCTGAAATTTCCCGGACATGAAGCCATTTACAATTGATAAGCAGCAATCACCATCTC GGAAACCCTCGCGAAATTGCTCATGACAATTGCTCATTCCAGACTTCTACTTGACCGTGC CGCTATGGGATCCTCCCTATAGTGAGAAATAACTCTCACCATTTCTTCCACTTTATTTCC GTTAACTATGGATTTTTTGCTTTGAGAAATAAAACGTCGCTATTTTGATTTTTTGTTTTT TTAATTAAAGAGTAAAAAGGACAAGTAAGGTTGACAAATTAAAAACAAAAAAAAGGACCA CACATGCTTGGCTACGAGTCTATGGGATCCTCCCTATGGTGAGAAAAATGAAAAATTATC CTTTCGATGCTTTTTTTTCTCCAATACGGAAAATGNNCACAANGATATTATAAAATGAAA GTACATTTTGATAAAACGACAAATTACGATCCGGCGAATTTATAGGCGAAAGCAATAAAC AAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACATTCACGTCCAAATGGGGG CTTAGATGAGAAAATTCTCGATCGATGCCTTGATTTC |
| GenBank Accession | BX287514 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:26817478 - go to primer design |
| BLAST e Value | 5e-25 |
| Hit Clone Code (BAC ID) | K21H1 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | BX287514 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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