SimpleSearch - Line and FST details


Line specific information

 
Line ID 403C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N438624)
Segregation Analysis 50:50:46
Confirmed for Hit At2g47750
Parent of DUPLO pair none
Parent of pair(s) 5835, 5837, 5856, 79063, 79076, 79090, 79111, 79129, 79130, 79131, 79132, 79134, 79135, 79136

Gene hit At2g47750

 
Sequence (A. th genome BLAST matches underlined) 
>59-K017864-022-403-C08-8409
TGATCTGAAATTTCCCGGACATGAAGCCTTTACATTGAATATATCCACGGACAGTACCTC
TTATGAGTGTTAGGTACTGTATGTACTAATTTCCATATGTTAGTGGTACAATGATTATGA
AACCATAGTCACACTGAGGTAAGAAAATTGATAATTCTTTCAAGATTTTCAATAGTAATG
GATAACATTGCAGAATTTGATGTGATGTCCTTCCATTTCCATAGATTGGCTTTGGAGACA
TATCCATTATCCTACAGCTATGGGATCCTCCCCTTATAGTGAGAATTATANCCTTTGACC
NATCCGCACATAACTGGACTTGACAAAGGAAAATGATTGCCCCTAGTTTTCGGAATGGAT
GAAACTTCAGCTCCTTCGGACTTACCAGACACAGCTGACCTCTCTGTGAAATCCTCACTA
TATTGAGTCTAATCGGAAATCTTTATTTCGACGTGCTTACATTCACGTCCAAAGGGGGG
GenBank Accession BX287625 [GenBank]
Graphic View Graphic view of gene At2g47750
Predicted Position of Insertion Chr2:19562038 - go to primer design
BLAST e Value 2e-116
Hit Clone Code (BAC ID) F17A22
Hit Gene Code At2g47750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation putative indole-3-acetic acid-amido synthetase GH3.9
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX287624 [GenBank]


Last Updated on 10.06.2021 13:37