SimpleSearch - Line and FST details


Line specific information

 
Line ID 405G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N438863)
Segregation Analysis 50:43:29
Confirmed for Hit At5g48160
Parent of DUPLO pair 12704
Parent of pair(s) none

Gene hit At5g48160

 
Sequence (A. th genome BLAST matches underlined) 
>55-K017820-022-405-G07-8409
ATGTCTGACTCCGTGTGCTTCAGCCTCACGATGTCCCTATGGGATCGTCCCTATAGTGAG
ATCCTCCCTATAGTGAGACTATGGGATCCTCCCTATAGTGAGCTTATGGGATCCTCCCTA
TCGTGAGGGTATGTGATTCTCCCTATATAGGGCGACACTGTATGATCCGCTCCAATTTGA
ACCTGAAGGTACACACCCTGAGGGAGCCTCCCGATTCTGCGCTACAGTGAAT
GenBank Accession FR809699 [GenBank]
Graphic View Graphic view of gene At5g48160
Predicted Position of Insertion Chr5:19528347 - go to primer design
BLAST e Value 0.089
Hit Clone Code (BAC ID) MIF21
Hit Gene Code At5g48160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation potyvirus VPg interacting protein (DUF1423)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR809699 [GenBank]


Last Updated on 10.06.2021 13:37