SimpleSearch - Line and FST details


Line specific information

 
Line ID 407B04
Vector Used pAC161
Line Availability available as T3 set from NASC (N438992)
Segregation Analysis 50:49:46
Confirmed for Hit At5g66020
Parent of DUPLO pair none
Parent of pair(s) 2233, 95795
Note

Gene hit At4g00390

 
Sequence (A. th genome BLAST matches underlined) 
>26-K017978-022-407-B04-8409
TTGAGGCGATGTTGGATAAGAGTGTGCAATTGACTCGACTTCAGTCTTACTTCGTTGATG
CTTCGAAGAACTAAAGCTACCGATTCAGTGTAGCCCACT
GenBank Accession BX287991 [GenBank]
Graphic View Graphic view of gene At4g00390
Predicted Position of Insertion Chr4:171779 - go to primer design
BLAST e Value 5e-16
Hit Clone Code (BAC ID) F5I10
Hit Gene Code At4g00390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DNA-binding storekeeper protein-related transcriptional regulator
Insertion Classification CDSi
Confirmation Status failed

Gene hit At5g66020

 
Sequence (A. th genome BLAST matches underlined) 
>26-K017953-022-407-B04-8409
ACAGATGTGATGGAATCAAAGTGCAGGTATCTATGGGATCCTGCTTATAGTGAGAGTGAG
ATAACACTCCTGTTACCAAGTCTTCTCGATCTGCTAACCAGTTAACATTCCTAGTTGATG
ATAGCACAGGAGAGATCCTATTTGTGTACATACAAAACAAATCGGGGATGATTTATACTC
TATGGCATCCTCCCTATATTCTGATTCGGAAATCTTTATTTCGACGCGGCTACATTCACG
TCCAAATGGGGGCTTAGATGAGAAACTTCACGATCGATGCCTTGATTTCGCCATTCCAAT
CCTCCCTATAANGAGATNTTNNNGCNTNNNNANNNGNGGNTTNTTCNNNTTCNGAAATCT
TTATCCCCACGGGGCTACATTCGCGTGGCAATGGGGGCTTAGATGAGAAACTTCACAACC
GATGCCTTGATT
GenBank Accession FR809709 [GenBank]
Graphic View Graphic view of gene At5g66020
Predicted Position of Insertion Chr5:26402518 - go to primer design
BLAST e Value 2e-05
Hit Clone Code (BAC ID) K2A18
Hit Gene Code At5g66020 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phosphoinositide phosphatase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37