SimpleSearch - Line and FST details


Line specific information

 
Line ID 408C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N439102)
Segregation Analysis 50:48:41
Confirmed for Hit At5g05920
Parent of DUPLO pair none
Parent of pair(s) 95364, 95366

Gene hit At1g74920

 
Sequence (A. th genome BLAST matches underlined) 
>81-K111837w-0022-408-C06T-8409
TCCCCGTGATCGTTTTTTCTGTCTTCGGATCACTTGTCAATTTCCCATCATGCTTGCAGT
ACAGCAACCAGGTACTAAAAGGGAAATAGAGAACTGAGTTCTGATGTATAGTGATTAACT
TTTGTCACTCTAACTCTGAAGCGTTTAGCTTTTAGAGCATCAATCANATCACATCTNACC
TGCCCGGC
GenBank Accession FR809732 [GenBank]
Graphic View Graphic view of gene At1g74920
Predicted Position of Insertion Chr1:28140349 - go to primer design
BLAST e Value 1e-42
Hit Clone Code (BAC ID) F25A4
Hit Gene Code At1g74920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation aldehyde dehydrogenase 10A8
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g05920

 
Sequence (A. th genome BLAST matches underlined) 
>57-K111838-0022-408-C06T-8409
ACATTGACCAATTGGTAGCAGTTTAGAAGGAGTCCACAACACGTTCTACAAGGAAAAGCC
TGAGAGAGAAGGATTCACCGACGAAGTCTATGATGCTAGAGAGGAATCAAAATCTATCTC
CACTAACCTGCCCGGCCGCTAGCTAGGGTGCTTGGCCGCTACCTGTCCGGCCGCTATTCN
GATCCCGCCTAAGCTGCCCGGCCGCTAAGGTTGCGGTNGCGCNTGNCTNACCTGCCCGGC
CGC
GenBank Accession FR809733 [GenBank]
Graphic View Graphic view of gene At5g05920
Predicted Position of Insertion Chr5:1778762 - go to primer design
BLAST e Value 9e-37
Hit Clone Code (BAC ID) K18J17
Hit Gene Code At5g05920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation deoxyhypusine synthase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR809733 [GenBank]


Last Updated on 10.06.2021 13:37