SimpleSearch - Line and FST details


Line specific information

 
Line ID 408C10
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 91399, 91401, 91402, 91403, 91404, 91405, 91406
Note

Gene hit At5g01390

 
Sequence (A. th genome BLAST matches underlined) 
>75-K017980-022-409-C10-8409
ATTTCTCATATTTATTTATGTCCATCGCTTTTGCTGGTTTAGTAATGACTGACGACTATG
GGATCCTCCCTATAGTGAGATCGCCTATAAATACGACGGATCGTAATTTGTCGTTTTATC
AAAATGTACTTTCATTTTATAATAACGCTGCGGACATCTACATTTTTGAATTGAAAAAAA
ATTGGTAATTACTCTTTCTTTTTCTCCATATTGACCATCATACTCATTGCTGATCCATGT
AGATTTCTCCATATTTATTTATGTCCATCGCTTTTGAAGGTTTAGTAATGACTGACGACT
ATGGGATCCTCCCTATAGTGAGATTATCGCATTCTACAGCGCGTGAGGGCGTGGAAAAGA
CCCGTTATGAGCGCCCCCCTCATATAGGAAAACTAAAATAGGAAACCGTCCAAACAGACA
ACAAGGTCAAGACCGGAGGGGGCAAAAAGCGGCAAAACAAGATACCCCCAACAGAAGTAA
TACACCAAACAACTAACTTCCACAAGACCCCTAAGGCAACATAGACACAACCATACCATA
AAAAAACCCTACGAAGAAACAAAAACGAAAACAAATATCCTACAAAAAACATAGTTCCGT
AACCCACCTGACATGTAAACAACCGAACCCCCCAGACCACCGACAATATTGAGGCCGCAA
ATTATAATACTAAAAAGC
GenBank Accession FR809737 [GenBank]
Graphic View Graphic view of gene At5g01390
Predicted Position of Insertion Chr5:160568 - go to primer design
BLAST e Value 0.090
Hit Clone Code (BAC ID) T10O8
Hit Gene Code At5g01390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DNAJ heat shock family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 408C09
Other FSTs Supporting this Hit FR809737 [GenBank]


Last Updated on 10.06.2021 13:37