SimpleSearch - Line and FST details


Line specific information

 
Line ID 415E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N439794)
Segregation Analysis 50:6:6
Confirmed for Hit At1g31690
Parent of DUPLO pair none
Parent of pair(s) 89613, 89615, 89621, 89623, 89624

Gene hit At1g31690

 
Sequence (A. th genome BLAST matches underlined) 
>13-K018038-022-415-E02-8409
ATGAGCATTTACAATTGATATATCGATCTAACATGCATGGTTAANTCTTATTATTTATTT
ATGCTATCGCACTCTCCGTATAGTGAG
GenBank Accession BX288484 [GenBank]
Graphic View Graphic view of gene At1g31690
Predicted Position of Insertion Chr1:11346418 - go to primer design
BLAST e Value 4e-16
Hit Clone Code (BAC ID) F27M3
Hit Gene Code At1g31690 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Copper amine oxidase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g62050

 
Sequence (A. th genome BLAST matches underlined) 
>13-K026165-022-415-E02-8409
GTGTCATAACCGATGCTATGGGAGCCTCCCTGTATGGTAGGTATGGTGAGCCCCCCTTTC
CTGAGGTGTGATTTTACTGGAACGCTGCCGCACATGAGTTTGCTTGCTCCCGAGCATGCG
TTCCTCCCTATACTGCGTTGTTCTCCTCTTCGACTTGGATTTCTTCATTTTACCACAATG
ACCCGGCTTTCTGTTACTACTATTCATGCTTGTCCATTTATACCCAATTGGTATTGCGAA
TGGGTCCGGCGTTTGAGGCTTCCTCCTCTTCTACCCTTCGATGTGAATCTTTTCTGGTGG
GenBank Accession CR397247 [GenBank]
Graphic View Graphic view of gene At1g62050
Predicted Position of Insertion Chr1:22936202 - go to primer design
BLAST e Value 5e-36
Hit Clone Code (BAC ID) F8K4
Hit Gene Code At1g62050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ankyrin repeat family protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37