SimpleSearch - Line and FST details
Line specific information
| Line ID | 415E04 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 94287, 94288, 94290, 94291 |
| Note |
Gene hit At1g74180
| Sequence (A. th genome BLAST matches underlined) | >29-K026165-022-415-E04-8409 AGTGAGTTGAATGAGCCGCCGGGTTCTTGATCTCTCATCAAACCAGTTAAGTGGAAATCT ACCAGGTATGGGATCCTCCCTATAGTGAGTCNNATTAATCNNNNATTTANGGAATATTCT ATATTGTTAGTTGTTTTAAGCGATGGGGGGGGGGGATTGTATTTTGGATATTNTTATANT TGGGAGTATTGTTTNATAGATAAATGGGTATGTTTAATTAAATGAAAAAAAGGTATATTT TAATAGAATATATGTTAAA |
| GenBank Accession | CR397249 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:27899323 - go to primer design |
| BLAST e Value | 2e-17 |
| Hit Clone Code (BAC ID) | F9E11 |
| Hit Gene Code | At1g74180 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | receptor like protein 14 |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 380E04 |
Gene hit MWF20
| Sequence (A. th genome BLAST matches underlined) | >29-K018038-022-415-E04-8409 CATTACATATGATACTCTTTGTTTCGTTCGTTTCACGCTATGGAATCCTTCGTATAGTGA GACGCCGGGAACCCCCCGGACCGGAGTTTGTGTGATTTTCAAAATGTAATTTCATTCTAT ATTAACACAGACGGAATCTACCTTTTGTGAAATGAAAAAAAATTGGTCATTACTCTTTCT TTTTCTCCAGATTGACCATCATACTCATTGCTGAGAAATGTAAATTTCCCGGGCATGAAT CCACTTACAATTG |
| GenBank Accession | FR809885 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:17449124 - go to primer design |
| BLAST e Value | 0.023 |
| Hit Clone Code (BAC ID) | MWF20 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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