SimpleSearch - Line and FST details


Line specific information

 
Line ID 420C05
Vector Used pAC161
Line Availability available as T3 set from NASC (N440253)
Segregation Analysis 50:50:46
Confirmed for Hit At5g47720
Parent of DUPLO pair none
Parent of pair(s) 11092

Gene hit At5g47720

 
Sequence (A. th genome BLAST matches underlined) 
>35-K018101-022-420-C05-8409
TGATCTGTAATTTCCCGGACATGAAGCCTTTACATTGAATATTTCCGGCCCTTGTGGAAC
AGGTCTTCTTTGTGAATGTCTTAACTGCCAATCTGGGGCAAGCACCTTCTAGACATGTTG
CAGCTTGGTGCTTGGATTCCCTATTCTGTGATGCTAGCACCACTATGATCACAGTCTGTG
CTGCAGGACATGAAATGTAAGAACCTTTTATTACTCTCCTTCTACTCCTCATATATCATT
CGAACGGTGTAGATCTGACTGCTTTTACTTCACTTGGAACCTCGTCTGCTATGCTTTCGG
AT
GenBank Accession BX288825 [GenBank]
Graphic View Graphic view of gene At5g47720
Predicted Position of Insertion Chr5:19332131 - go to primer design
BLAST e Value 3e-54
Hit Clone Code (BAC ID) MGC1
Hit Gene Code At5g47720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Thiolase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g02370

 
Sequence (A. th genome BLAST matches underlined) 
>35-K018140-022-420-C05-8409
TGTCTGTAGATTTCCNGGACATGAGCCTTTACATTGAATATATCCTAGTATCTTGAGTGA
TATATTGCTAATTCCTCTCATTATACAGACGCTCTATGGGGAGGACGCGGAGCTGACTAT
GATCCATTGTAATTCTTCTCCAAAGATGTCTCACTCGATCCTACTATGGGATCCTCCTCT
ATAGAGAGAAAACTTCGTTCCTATGGGATCCTCCCTATAGCGAGACAACCGTAAGTGCGT
GGGAACAACCTAGGTTTTTCCGGGGGCCCACCACGCTGCCGGCGCCGGAACGCCGATCAT
ATAAGACCACGAAGCTTGATTAGGTTTCCGTAGGGCGAGATTTGTGACATTCGATAAACG
CCTATGGGATCCTCCCTATGGTGAGA
GenBank Accession BX288826 [GenBank]
Graphic View Graphic view of gene At2g02370
Predicted Position of Insertion Chr2:621081 - go to primer design
BLAST e Value 1e-07
Hit Clone Code (BAC ID) T16F16
Hit Gene Code At2g02370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SNARE associated Golgi protein family
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37