SimpleSearch - Line and FST details


Line specific information

 
Line ID 420G01
Vector Used pAC161
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 3919, 4252, 7204, 75709, 75716, 75724

Gene hit At5g13610

 
Sequence (A. th genome BLAST matches underlined) 
>07-K018101-022-420-G01-8409
TGATCTGANATTTGCCGGACATGAAGCATTTACAACTTGATATATCCTGGACTAACTCAA
AACGGGCACTCGATAGGGATCCTCCCTACTATGAGATTAATCTTATCTATGGGATCCTCC
CTATAGTGAGAGGAAGATAGAATTGAAAATACGCCAGTGTATCACAATTCAGGATCTATG
GGATCCTCCCTATAGTGAG
GenBank Accession FR809964 [GenBank]
Graphic View Graphic view of gene At5g13610
Predicted Position of Insertion Chr5:4382969 - go to primer design
BLAST e Value 4e-10
Hit Clone Code (BAC ID) T6I14
Hit Gene Code At5g13610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sporulation RMD1-like protein, putative (DUF155)
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At1g57620

 
Sequence (A. th genome BLAST matches underlined) 
>07-K018140-022-420-G01-8409
TTTCCCGGACATGTAGATTTTCATGCTGATCTTGTANGTAATTTAATTGTCTCAGAGGCT
CGGAAATATGGAGAGCTGACCTCGATCTTTTCTTTCCTATGGGATCTGCCTTATAGTGAG
AGGCANGNATCANGTATGTATGGGGCTATGCCATATGCAGTATGGATGCCAATTCTTGTC
AAAAGAAGATTTTTTTGTGGGTTTTATTAAAAAAAAATATTCCAAATAAAATTAACCGCC
AAAATTTGAAAAACTATGGGATCCTCCCTATAGTGAG
GenBank Accession FR809965 [GenBank]
Graphic View Graphic view of gene At1g57620
Predicted Position of Insertion Chr1:21344219 - go to primer design
BLAST e Value 8e-27
Hit Clone Code (BAC ID) T8L23
Hit Gene Code At1g57620 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation emp24/gp25L/p24 family/GOLD family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37