SimpleSearch - Line and FST details


Line specific information

 
Line ID 423C02
Vector Used pAC161
Line Availability available as T3 set from NASC (N440538)
Segregation Analysis 50:50:48
Confirmed for Hit At2g38230
Parent of DUPLO pair none
Parent of pair(s) 69420, 97536

Gene hit At2g38230

 
Sequence (A. th genome BLAST matches underlined) 
>11-K017847-022-423-C02-8409
TCTGTACATGACGAGGTTTTACTTACGCGAAAAGATCGCTGCGCCGTATGATTTGGTTGT
GCGACTAAGGAGCTTGGGAGGTACCGGTGGTTCAGTTCGCTGCTGGAGGAGTGGCGACGC
CGGCGGATGCGGCGTTGATGATGCAGTTGGGATGTGATGGAGTGTTTGTTGGGTCGGGTG
TTTTCAAGAGTGGAGATCCGGTGAAGAGGGCTAAGGCTATTGTTCACGCGGTTACGAATT
ATAGAGACGCGGCGGTGTTGGCGGAGGTGAGCTGTGGATTACGTGAAGCCATGGTTGGTC
TTAATTTGGATGATAACGTTGAGAGGTCGCTTATGGGATCTCCCTTAATAGTGAG
GenBank Accession BX289084 [GenBank]
Graphic View Graphic view of gene At2g38230
Predicted Position of Insertion Chr2:16012061 - go to primer design
BLAST e Value 2e-154
Hit Clone Code (BAC ID) F16M14
Hit Gene Code At2g38230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pyridoxine biosynthesis 1.1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g07517

 
Sequence (A. th genome BLAST matches underlined) 
>11-K017809-022-423-C02-8409
TGTCATGACATTTCCCGGACTGAAGCCATTTACAATTGAACTGTCCTTTACATGAGAGAT
CTTGCATTACAAAATCCGGTGGAAAGCTTCCACCTAATAATCCTTCATTACGATGTCTGG
CATTCTGAACTA
GenBank Accession BX289083 [GenBank]
Graphic View Graphic view of gene At4g07517
Predicted Position of Insertion Chr4:4325077 - go to primer design
BLAST e Value 4e-16
Hit Clone Code (BAC ID) T3E15
Hit Gene Code At4g07517 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown


Last Updated on 10.06.2021 13:37