SimpleSearch - Line and FST details


Line specific information

 
Line ID 424A09
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 12638

Gene hit F12M12

 
Sequence (A. th genome BLAST matches underlined) 
>65-K017810-022-424-A09-8409
TGATCTGTAATTTCCNGGACATGAGCATTTACAATTGATATATCCTGCTTACAAAATGTA
AGATCATAGAGAATCTTGGAGCAATAAACCTATGGGATCATCCCTATAGTGAGATCCCTA
TACGAGACGATTTTCTTGACAATACTAATATGTTGTCTCACTCAGATGGTTTAACATTGA
TTTATGTTTCTTTTGGGTCTGGGTTCGAGTGGCGCCTCCTCCAAAGACGTTTTTTTATTT
TTATTTTTTTCTAAAAACTGTTTCTTCTTCAAAATTCATTATCTTTTTATTGTAAACCCT
ATGGGATCCTCCCTATAGTGAGAAATACAAATCGATCTGAAATTCCAAAATGAAATCACT
AAAGCAAATCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX289181 [GenBank]
Graphic View Graphic view of sequence BX289181 of line 424A09
Predicted Position of Insertion Chr3:17019623 - go to primer design
BLAST e Value 1e-37
Hit Clone Code (BAC ID) F12M12
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g50920

 
Sequence (A. th genome BLAST matches underlined) 
>65-K017848-022-424-A09-8409
GATCATGTAGATTTCCNGAGACATGAACCCATTTCATATGGCGCAGTCGCGTATTTTTTT
CACCCTCCCTTATCTCTCTCTCTATCTATCTACGGGCTGATTCTTTATTTTTTTTCTTTA
TACGGTAAGGGTCTATAACACTTGATCGGTGCACCATCGTGCACGCTATGGGATCCTCCC
TATAGTGAGGATGTTTGTTCTTGAACCTTAGGGCTTCGTATTTGTTCAAAGCTAGGGGAT
CCTCCCCTATAGG
GenBank Accession BX289182 [GenBank]
Graphic View Graphic view of gene At5g50920
Predicted Position of Insertion Chr5:20720338 - go to primer design
BLAST e Value 9e-33
Hit Clone Code (BAC ID) K3K7
Hit Gene Code At5g50920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CLPC homologue 1
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37