SimpleSearch - Line and FST details


Line specific information

 
Line ID 426C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N440825)
Segregation Analysis 50:50:44
Confirmed for Hit At1g52827
Parent of DUPLO pair none
Parent of pair(s) 79775, 79785, 79793, 79805, 79808, 79812, 79813, 79814, 79815, 79816
Note

Gene hit At1g52827

 
Sequence (A. th genome BLAST matches underlined) 
>03-K018095-022-426-C01-8409
GATTTTCGAATTTCTGGATTATTTTAAAGAATTTGGGTGCTTCTTCTTCGTCACTTTCCC
GACGGACTATACGAGCTATGGGATCCTCCCTATAGTGAGAGATCTGCTACCTGCAAACTG
ATATGATCATTTAATACGGAAGATATGGCAACATTTATTTGGACCGACAGAGTGGTTAGA
ATCTTCACCCAAAACTACATTTCTTATGTACCCATAGGGACTATATTGGAATTGGATTTG
AATCATATTTCGGATCAATCTATATTGATTGACTGCCTCCATTATGTTGTTGCTATGGGA
TCCTCCCCTATAGTGAGANNNNNNNNNTNCNNTTNNNCTTNCTTNGTTTCCACTATCTTT
GAATCTNCCATAAACCCATTATTTACCCAAAGGATTTATCATGTTATAATAATCACGTAC
CACTTGATTTTTAAGAGAATATAATAGTAAGTCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX289416 [GenBank]
Graphic View Graphic view of gene At1g52827
Predicted Position of Insertion Chr1:19671873 - go to primer design
BLAST e Value 1e-47
Hit Clone Code (BAC ID) F14G24
Hit Gene Code At1g52827 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cadmium tolerance 1
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g63140

 
Sequence (A. th genome BLAST matches underlined) 
>03-K018075-022-426-C01-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTTACTATTGAAAGCACTTGATCAT
CGAATCCTTTGTATACTTCTAAAGCCTTCTTCATAATCAATGTGGAAGCTTCCGACATTG
CCCGGTTAATCATTTGCAACGAATTGTTCGTTAGAACCTATGAGTTCTAAAAACACTCAA
GCCATGAGCATAGGGGAATGCATCTTTTCCTTCTAATATCATGTCTTTGAGATGTTCCCT
ATGGGATCTCGCGTTATAGTGAG
GenBank Accession BX289415 [GenBank]
Graphic View Graphic view of gene At1g63140
Predicted Position of Insertion Chr1:23418250 - go to primer design
BLAST e Value 5e-65
Hit Clone Code (BAC ID) F16M19
Hit Gene Code At1g63140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation O-methyltransferase family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 426C02


Last Updated on 10.06.2021 13:37