SimpleSearch - Line and FST details


Line specific information

 
Line ID 426E07
Vector Used pAC161
Line Availability available as T3 set from NASC (N440855)
Segregation Analysis 50:50:48
Confirmed for Hit At1g11560
Parent of DUPLO pair 120
Parent of pair(s) none

Gene hit At1g11560

 
Sequence (A. th genome BLAST matches underlined) 
>53-K018075-022-426-E07-8409
TGTCCTGAAATTTCCCGGACTGAAGCCATTTACAATTGAAGCCATTGGCGGGGATGAGTG
ATCTTCACGTAAGGTTAGTTTTTCAAGATTGTGGAACTGATTAGTTAGTGTTTTGGCTTT
CAATACTTGAACATGCATATAGCCAAGTTTATAGTTTAAAGATTCAATAATTGCAGTTTA
GGATTCACGAATTTGTGCTAACTAGAGGAATGATTGCTCGAAGACTTATAATGCTTATGG
TGTTGCTTTGCATCCATTGAGAAAGAGTACTCTACCAAATAATCGTTGCTTTACTATGTG
TGAAGGTTTGGAAAAAGATTGTATGCAATACTTGACCCACAAGAAACCTTCTTAAAAGTG
AAAAGATTCTCTCTTTGTTCTTTTCTTCCAGCTTTGTTTAAAGTTAAGCATCTAATTCCT
TCACACCCTATGGGACTCCCNNNTATGGGGAGAANNNNNNNNNNNNNNNNNNNTNNCNNN
NTTTTTTTTNTTTTCAAAANTGTAAATATCCCCCCCGTTTTTTAAAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNANANANANNNNNNNCNNCANNCCNNNN
CCNCCCACCACCCCCAACCAAAAATNCCTCTACCACCCACCACTTACACACACCCCCCCC
CCCCACCTCAAACTACAACCTCCAAACCCTACACCNCCAAAAACACACACACACCACTAC
TNCCTCCTACACCCCCACTCAATTTACAATATCACTCCCCACACAACAANCCACCACACG
AACCACCCCCATACACCAAAGTCTCTCAACCCCTCACATCCCCCCACCACCCNACCCCCT
ACCATATATAACACCATACAATCCCTACCNAGCCTCCAAATCTCAAATATCCAAACAATA
AC
GenBank Accession BX289451 [GenBank]
Graphic View Graphic view of gene At1g11560
Predicted Position of Insertion Chr1:3882807 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T23J18
Hit Gene Code At1g11560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Oligosaccharyltransferase complex/magnesium transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37