SimpleSearch - Line and FST details


Line specific information

 
Line ID 428D09
Vector Used pAC161
Line Availability available as T3 set from NASC (N441037)
Segregation Analysis 50:49:49
Confirmed for Hit At5g21482
Parent of DUPLO pair none
Parent of pair(s) 93484

Gene hit At5g21482

 
Sequence (A. th genome BLAST matches underlined) 
>68-K018077-022-428-D09-8409
TATAGTGAGACGAAAAATATAGNGACTAACCTACCCTTTGGTAACCTACAAAAGGATATT
TTCGAACTGTAAAATAAAAAATTTAACGTTAGTTCATATTGGGTCCCTACAAATTTCATC
TCTTTCCCTATATGACGCTAACCTTAACGACGGTTACAATACATATCCGTCACCCACCCA
ACCGTAATACCTAATACGGCATCGTATTAGTTTAGTATTCTTTTTTTTATCTCGCCTACA
AAATCTAAACGACCACACTAAATTCCAACTTTTATTGTACTTAAAACCCCGTACGGGTAA
AAAAAATGACGAGGGGACTGAAGAAAGACACGTGTGCCACATTGGCGACAATTTGTTGAT
CACACGACTTGCGACTTGTGGAGCCTTTTTTTAGTTTAAGCATGCACGACTAATCATCAC
ACGTGATAAACACATGCCATAAAACTAAACTATGGGATCCTCC
GenBank Accession CR770386 [GenBank]
Graphic View Graphic view of gene At5g21482
Predicted Position of Insertion Chr5:7229542 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F13M11
Hit Gene Code At5g21482 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytokinin oxidase 7
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit F5M15

 
Sequence (A. th genome BLAST matches underlined) 
>68-K018097-022-428-D09-8409
ATTTCCCGGACATGAAGCATATTGACTTGTGGCGGAACGGACTAATTTCAGGTGAAATTA
TTGAATCACCATATATTTAATCTAACTCTTGCATGCTTTTTTCATCAAAATTTCTGATTT
TCTTTACATAAAAACTTTTCATGAGAATTTATCCATTGAAGCTCCATTGAGTAAACAAGT
GTTTCCCCATAGATAAAATAATTTTATAGATTTTAGACACAAATGATCTAACTCTAAACA
CAAACTTGGAGAACAGCTATGGGATCCTCCCTAATTAGTGAG
GenBank Accession BX289587 [GenBank]
Graphic View Graphic view of sequence BX289587 of line 428D09
Predicted Position of Insertion Chr1:7087900 - go to primer design
BLAST e Value 3e-131
Hit Clone Code (BAC ID) F5M15
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37