SimpleSearch - Line and FST details
Line specific information
| Line ID | 434A07 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3032, 6954, 60097, 93083, 93084 |
| Note |
Gene hit At1g17940
| Sequence (A. th genome BLAST matches underlined) | >49-K018179-022-434-A07-8409 TGATCTGAAATTTCCCGGACATGAAGCAATTTCATACTCTATACGCGTGACATTGCTGAT GTGGCTATGGCAGCGGCGAGCTGCATTAGAGGCATTGTTGTTGAACAATGCGAAAAGTCC AGATCCAATGGCTTCTTGTTCTTCAATAAACAGGTCTTCGGGAGCACGAAACGCTCCGTG GATGGCCACGCCCATGATCCCAACTGCTATGGGATCCTCNNCTATATCGAGAATACTTTT TGTTTTTCAGATTCAGAATTCGTTTTCCTTTTTGAATCCTATTCAAATTTTGAGCGATTC AATGCTGATTTAGAGGTTTAAGCTATCTATGGGATCCTCCCTATAGTGAGGAAANAANAA NNAGTANNCACCNTTTTTTTTTCAATTCAAAGATGAAGATCCCCGCACNCGTTATAATAA ANNNTNNNTCNTATGGGCNNAAACACCGGCGGCGGGAACACTAGTCACGAAATGTAAATG AAGACGTCTTTTTCGATTTTAGCCACAACATCAATCCCCCCCAGAGAAAATACCCAACAT AAGTAAACATCCGTTCGTAGATAACAAACACCTACCCCGTACAGCAAATTGCTCAAAAGC GAAACTATCAACCAAGGTGATAGTCCCGAACAGGACACAAATACCCACAATTAAGCGCCA GCCAATAACCGCCAACCGACCGGACACGCATCACTCACCAGTATACACATAATTCTTCGC ACCACTGAAATATGCGCCCCGCCTTAAACAATCAAAAGTAGCAGATGACAGAAACGCGAC GTAGGACCGTCGACCATTCTCGAGGACTTATTACCGCACATAGTAGCATTAACCATGACG CGGCATATAAATACCTAGCGCCACGCCCCAAACTATAATAAATTACC |
| GenBank Accession | BX290188 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:6173196 - go to primer design |
| BLAST e Value | 2e-12 |
| Hit Clone Code (BAC ID) | F2H15 |
| Hit Gene Code | At1g17940 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Endosomal targeting BRO1-like domain-containing protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR810181 [GenBank] |
Gene hit At5g07110
| Sequence (A. th genome BLAST matches underlined) | >49-K018179-022-434-A07-8409 TGATCTGAAATTTCCCGGACATGAAGCAATTTCATACTCTATACGCGTGACATTGCTGAT GTGGCTATGGCAGCGGCGAGCTGCATTAGAGGCATTGTTGTTGAACAATGCGAAAAGTCC AGATCCAATGGCTTCTTGTTCTTCAATAAACAGGTCTTCGGGAGCACGAAACGCTCCGTG GATGGCCACGCCCATGATCCCAACTGCTATGGGATCCTCNNCTATATCGAGAATACTTTT TGTTTTTCAGATTCAGAATTCGTTTTCCTTTTTGAATCCTATTCAAATTTTGAGCGATTC AATGCTGATTTAGAGGTTTAAGCTATCTATGGGATCCTCCCTATAGTGAGGAAANAANAA NNAGTANNCACCNTTTTTTTTTCAATTCAAAGATGAAGATCCCCGCACNCGTTATAATAA ANNNTNNNTCNTATGGGCNNAAACACCGGCGGCGGGAACACTAGTCACGAAATGTAAATG AAGACGTCTTTTTCGATTTTAGCCACAACATCAATCCCCCCCAGAGAAAATACCCAACAT AAGTAAACATCCGTTCGTAGATAACAAACACCTACCCCGTACAGCAAATTGCTCAAAAGC GAAACTATCAACCAAGGTGATAGTCCCGAACAGGACACAAATACCCACAATTAAGCGCCA GCCAATAACCGCCAACCGACCGGACACGCATCACTCACCAGTATACACATAATTCTTCGC ACCACTGAAATATGCGCCCCGCCTTAAACAATCAAAAGTAGCAGATGACAGAAACGCGAC GTAGGACCGTCGACCATTCTCGAGGACTTATTACCGCACATAGTAGCATTAACCATGACG CGGCATATAAATACCTAGCGCCACGCCCCAAACTATAATAAATTACC |
| GenBank Accession | BX290188 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:2206761 - go to primer design |
| BLAST e Value | 2e-77 |
| Hit Clone Code (BAC ID) | MOJ9 |
| Hit Gene Code | At5g07110 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | prenylated RAB acceptor 1.B6 |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
