SimpleSearch - Line and FST details


Line specific information

 
Line ID 434C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N441598)
Segregation Analysis 50:50:49
Confirmed for Hit At4g01750
Parent of DUPLO pair none
Parent of pair(s) 68796, 97250, 97251
Note

Gene hit At4g01750

 
Sequence (A. th genome BLAST matches underlined) 
>43-K018189-022-434-C06-8409
TATAGTGAGANACGACNCTTCTCTTCTTCTCCTCGTTCTTATTCTTCAAGTCTCGACCGT
CCCATCTTTCTCCTTAACCGCAACGGTCTCCTCCTTGTCCTTCTCGCTCTCTTCCTTCTC
CTCGGTGTATTCTTACCTTGGCCCGGATCTCCTTTGTTGCTATTTCCGAACAAAGTCTCT
TCTCCTTCTTATGCTTCTTCTTTGTCTCCGCATGCCAAATCTGAATGGCGTAACTATACC
CTTGCTCAGGCAGCTAAGTTTGTCGCCACGAACTGTACTGTGATCGTCTGCGCCGTGAGC
TCACCATTCTTGCCTTTTCTCAACAACTGGTTGATTAGTGTTCCTATGGGATCCTCCCTA
TGGTGAG
GenBank Accession BX290206 [GenBank]
Graphic View Graphic view of gene At4g01750
Predicted Position of Insertion Chr4:756534 - go to primer design
BLAST e Value 1e-164
Hit Clone Code (BAC ID) T15B16
Hit Gene Code At4g01750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation rhamnogalacturonan xylosyltransferase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g01040

 
Sequence (A. th genome BLAST matches underlined) 
>43-K018179-022-434-C06-8409
AAAGTCTGTGTATGTATTATGAGATAGCTACTTCTATGGCTATGGGGATCTCCNTATAGT
GAGAGAAAAANGGANAGGTCCTCTCCCTTTTTTTATTCTTCCCAAATGGTAATTGCCGCG
CCCGTATATAAAANNNNNNNNCNNNNNTACNNNTNNNGNNNNCCGCCGCCGCGCGGGGGA
CATGACGGGGGCCGGCCCGCCCGCTCAGGGACGGGCGAAGCAGAAAACGGACAGCACAAC
GCAAGGAATAGCAAGGACAGACAGGAAGAACGACAACCAAAAGACGAGAGAAAAGACGAA
AAAAAAAGGAAAACAAAACAAAACAAACCCCCAAAAGCCGAGACAACACGACGGGGAACG
GGAACCCGAGCAGAAGCAAGAAAGAAA
GenBank Accession BX290205 [GenBank]
Graphic View Graphic view of gene At1g01040
Predicted Position of Insertion Chr1:28569 - go to primer design
BLAST e Value 2e-12
Hit Clone Code (BAC ID) T25K16
Hit Gene Code At1g01040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation dicer-like 1
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 405E05


Last Updated on 10.06.2021 13:37