SimpleSearch - Line and FST details


Line specific information

 
Line ID 436D04
Vector Used pAC161
Line Availability available as T3 set from NASC (N441800)
Segregation Analysis 26:15:14
Confirmed for Hit At2g22630
Parent of DUPLO pair none
Parent of pair(s) 3614, 3646, 9793

Gene hit At2g11830

 
Sequence (A. th genome BLAST matches underlined) 
>28-K018181-022-436-D04-8409
TGATCTGTAGATTTCCGGACATGAGCATTTACAATTGAATCATCACGTACGAATCGTTTT
TGGACTTGTAACACAAGGATCACTTTTTTATGTTTTTGCGCTATGGATCTTCCGTATAGT
GAGANNCNNCCANNGGGCGTTGCTGCTTTTCTTTCCATTCCCCACGGGAGAGCCTGCCCT
CCCATGAGATAATGACTTCTGCTCAACCGCCCTCACGTCGGATAGCCTGACGACCGACCA
GCATTCAAAGAGATCCCTTGGCTCGTCTGGGTCGGCTA
GenBank Accession FR810219 [GenBank]
Graphic View Graphic view of gene At2g11830
Predicted Position of Insertion Chr2:4772447 - go to primer design
BLAST e Value 4e-16
Hit Clone Code (BAC ID) F7E22
Hit Gene Code At2g11830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At2g22630

 
Sequence (A. th genome BLAST matches underlined) 
>28-K018191-022-436-D04-8409
AACAATCACTCCATCAACCCCCTGTGTTGTGATATGTCATACACTATACCATGCATCCTC
TCCGTAGACCTCCTATGGGATCCTCCCTATAGTGAGACTTATATACNAGTAGATGGGTAA
TTTTTTTATCAGTTTACATATATCATCTCCAAATGTATGATATATCCTTAAAAATGCACA
ATTGATTGTAGTGATATCTTATACACTCCCATTTATCACTCTTTCAGTTTTCCAACGTTA
TACTTGTTTTTAGCTTTAATTACTATCTTCTCTACTCAAATGTTTCTAAATTTGGCAAAG
ACACACTGTCAGCCACATACACAATTTACAACCAATGACACACATGTCCACACACTGCCA
TGAGCCTACTTCAAATTAGTGTGTGTTTTCATCTTTACACTATGGGATCCTCCCTTATAG
TGA
GenBank Accession FR810220 [GenBank]
Graphic View Graphic view of gene At2g22630
Predicted Position of Insertion Chr2:9619356 - go to primer design
BLAST e Value 1e-157
Hit Clone Code (BAC ID) T9I22
Hit Gene Code At2g22630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation AGAMOUS-like 17
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37