SimpleSearch - Line and FST details
Line specific information
| Line ID | 437B11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N441879) |
| Segregation Analysis | 100:93:70 |
| Confirmed for Hit | At3g61430 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5227, 5274, 5280, 5303, 5330, 7528, 7535, 52866, 89538, 89539, 89540, 89541, 89542, 89543, 89544, 89545, 89554, 89555, 89556, 89557, 89558, 89559, 89560 |
Gene hit At3g61430
| Sequence (A. th genome BLAST matches underlined) | >82-K018192-022-437-B11-8409 TGATCTGTAATTTCCCGGACATGAAGCCATTTACATTGAAGTCATTCCGAGTGTTTGGGT TGTGAAAGAAGACTGATAAAGCTATAATCTTGAGAAAATTGTGTTTAGATTTATAGCTTC TTAGCCTGAACTTGTTCCATTTGTATCTGATTCAAGAAATCTCAGAAAGCTACAATCTTG GTGGAATTTGCAGTTTTCTAATATGAATTGTGTCCTTTAGCCTAATCTTGGAATGTATTT TTTTTATATGTAACTCTCAGGTGGACACATCAACCCAGCGGTTACTTTTGGTCTGTTCTT AGCCCGGAAGCTGTCGCTCACTATGGGATCCTCCCTAAATGGTGAGAGACAGNTNNNGGG NTNTGAACAGTCNNTAAGTAACCGCTGGGTTGATGTGTCCACACGAGAGTAAAAAAAGNN NNNNNTNCANGGCNCGNNNNGCCANGCGNCCCACCCCCNNCNNCCAANCCGCCCCNNANA CACAACNCANNCCANAACNAAACACCACAACCCCACCCCACAANCGAGAAGGGGCCCCCA CAACCACACNAAAANAAAACCANAAAAAANTGAAGAGAAACCCCCCACCAGGAAAATNCN GGAAAAAAACACCAACACACCACACANNACANNAAAAACGATATCNCCGAACCTTCTCCC CTACCATTCAAAAACACTTATCGGAATAAGGGCCCGGGGGGCGACGCCGCGCGTATAAAT TGGGCGCAACCATTATCGACGCANCCCCGAGAAGGGGGAAGCCACATTATTCTTCTCCAC CTTTTTGT |
| GenBank Accession | CR770389 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:22734034 - go to primer design |
| BLAST e Value | 7e-135 |
| Hit Clone Code (BAC ID) | F2A19 |
| Hit Gene Code | At3g61430 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | plasma membrane intrinsic protein 1A |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g38760
| Sequence (A. th genome BLAST matches underlined) | >82-K018182-022-437-B11-8409 GATCATGAGATTCCTGGACATGAGCCATTTACAATTGATATTTCCCGTTCTTGAGGACCT TTTGTCCTCTTGTGTGTCCAAGAATCATGGAATGTGCTCTGAGCGCTATGGGATCCTCCC TATAGTGAGAAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGCAGAT GTCCGCACCGTTATTATA |
| GenBank Accession | FR810228 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:18094582 - go to primer design |
| BLAST e Value | 3e-08 |
| Hit Clone Code (BAC ID) | T9A14 |
| Hit Gene Code | At4g38760 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | nucleoporin (DUF3414) |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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