SimpleSearch - Line and FST details


Line specific information

 
Line ID 438B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N441973)
Segregation Analysis 50:44:38
Confirmed for Hit At3g50700
Parent of DUPLO pair none
Parent of pair(s) 6840

Gene hit At3g50700

 
Sequence (A. th genome BLAST matches underlined) 
>66-K018214-022-438-B09-8409
GATCATGANATTTCCTGGACATGAGCCATTTACAATTGATATATCCTGAGAGAATCTACA
TGGATCAAAATCAAATCCTCCTCGACTTTAACAATTAAGCAATCAGGTAAAGAGTCTCTT
GTAGTGTTCTATGGGATCCTCCCTATAGTGAGAGAGAAAAAGAAAGAGTAATTACCAATT
TTTTTTCAATTCAAAAATGTACATGCCCGCACCTATATTATAANCCNNNCCNNNNNNNNN
NNGGNNNACNNNCCCACAAAACCAAACCCCAACACCAAAAAAACAACCAATGATACCAAG
AAACACCACTGCCCCCACCTAATTTGCACAGCGATAACCCCGTTTCCCACCACTACCATC
TCACTAATACCCCCCCATCCCACAGCTTCCCCCCATGCCGAACAAACACAACTTGCGTTG
CTATAAATCCCATAATACCCCCCCAATACCCCCCTTCCCACCCTTCCCCCACCCTGCCAC
CAGAACGCACATACCACCGACCCCCATTTACCCCCTCACCCCATACAATTCCCCCCTGTC
CACTCTTCCCCTCCTTCACCAACTTCATCCCCCCCCCCCCCCCCCTAACTCCCCACAACA
TACAACTATACCCACCACCAATTCCCCCCCCCCCCACACACCCAACTAACACCTTACCCC
CCACCCCCCCAACTTCTACTCGCCCACACAGTTATTCTACCCATATCCCCAAATATACAC
TCTACACTCCCCCGAAAATCACAAGCCTTTCTCCATACGTCCCCGCTATCGATTGCCTAT
CACCCTTAACACTTTGCGAAACCCAACACGCCCCCTCCCCCATCGTCCCTTCCCATCACT
CCCTTACCCAACCCATCCCCGAGAATACGCAGCCCCGTTTCCCCCCCCAATTTCTTATAC
ATCCCAACCTC
GenBank Accession BX290607 [GenBank]
Graphic View Graphic view of gene At3g50700
Predicted Position of Insertion Chr3:18841784 - go to primer design
BLAST e Value 1e-28
Hit Clone Code (BAC ID) T3A5
Hit Gene Code At3g50700 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation indeterminate(ID)-domain 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX290607 [GenBank]


Last Updated on 10.06.2021 13:37