SimpleSearch - Line and FST details


Line specific information

 
Line ID 438H04
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 9574, 94461, 94463
Note

Gene hit At3g17370

 
Sequence (A. th genome BLAST matches underlined) 
>32-K018214-022-438-H04-8409
TATCATGTAGATTTCCCGGACATGAGCCATTTACAATTGATATTGACCCATCTTTAACCC
TTGTTGCTTTACAGTAACCATTAATGAGTGTATTAAACGTTGAGCAGCTCTTGGATACCT
TTCTCGCCTGAGCTATGGGATCTCNCCTATAGTGAGACTTTTATATCAGTCACTTACATG
TGTGACCGGTTCCCAATGTACGGCTTTGGGTTCCCAATGTACGGGTTCCGGTTCCCAATG
TACGGCTTTGGGTTCCCAATGTACGTGCTATCCACAGGAAAGAGACCTTTTCGACCTTTT
TCCCCTGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX290670 [GenBank]
Graphic View Graphic view of gene At3g17370
Predicted Position of Insertion Chr3:5949270 - go to primer design
BLAST e Value 6e-43
Hit Clone Code (BAC ID) MGD8
Hit Gene Code At3g17370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pentatricopeptide repeat (PPR) superfamily protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit At5g60610

 
Sequence (A. th genome BLAST matches underlined) 
>32-K018206-022-438-H04-8409
ATACAGCTACTGTTGCCGGAACCTACGATATCATCTTGACCATTCAATTCATCCAGCGAC
CCACTGATTCTCGTCCATCTCTCTCTACCCAAGCCCTAGATTCTATTGCCTGAACAAGAA
ACAAGAATACTCGCCAAGACTCTAAGAATCTGCCTGAAGCCTATCAAACAAGATCATAAA
CTCAACAGAATTCCAGTCACTTTCAGAGAACCAAATCAGAATACAAATCACAACCCAACT
ATAATCAACCTATGGGATCCTCCCTCATGGTTGAGCGGGGTTTTCTCAGAAACCCTATGG
GATCCCCCTTATAGTGAG
GenBank Accession BX290669 [GenBank]
Graphic View Graphic view of gene At5g60610
Predicted Position of Insertion Chr5:24364163 - go to primer design
BLAST e Value 2e-67
Hit Clone Code (BAC ID) MUF9
Hit Gene Code At5g60610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/RNI-like superfamily protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37