SimpleSearch - Line and FST details
Line specific information
| Line ID | 439F11 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5921, 5966, 6003, 7727, 91603, 91618, 91655, 91661, 91670, 91683, 91688, 91692, 91695, 91697 |
Gene hit At2g34230
| Sequence (A. th genome BLAST matches underlined) | >86-K018207-022-439-F11-8409 TGATCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTAAACACTGAT AGTTTAAACCCATCATTATAAACCCGGACATGAAGTGAGAAAGAAAAGAGAAAGCTTTTT CTTGGAAGTGTATTGGTTCTGTTTCTGTTTACGAGGAAAAAACAGAGTCGAGGCGTTGAT ATACAGCTGTTGAGGGAGATAAAGAGACGGTCATGTGCAAGGCACGTGATCTTCATTGCG TAATAAGTTTTTCAAAAGACCAAACTCTCAGTGTGACATTTCGTCGAGCACCTATGGGAT CCTCCCCTTATAGTGAGANNNNANNNNANNCNNNNTTTCCTTNTTTTTTTTAATTCNANA ATTGTTGATTTGCTCACCAACCTAAAAGNAACNTGANCTGGGTTTAGACCGTCGTGAGAC AGGTTAGTTTTACCCTACTGATGCCCGCGTCGCGATAGTAATTCAACCTATGGGATCCTC CCTATAGTGAG |
| GenBank Accession | BX290763 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:14454605 - go to primer design |
| BLAST e Value | 8e-110 |
| Hit Clone Code (BAC ID) | F13P17 |
| Hit Gene Code | At2g34230 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ubiquitin carboxyl-terminal hydrolase-like protein, putative (DUF627 and DUF629) |
| Insertion Classification | 5' region |
| Confirmation Status | unknown |
Gene hit F25P22
| Sequence (A. th genome BLAST matches underlined) | >86-K018215-022-439-F11-8409 TATCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGTCCATTTAT TAGAATATATTGGCGGGTAAACCTAAGAGAAAAGAGCGTTTATTACAATAATCGGATATT TAAAAGGGCGTGAAAAGGTTTATCCGTTCGTCCATTTGTATGTGCATGCCAACCACAGGG TTCCCCTCGGGAGTGCTTGGCATTCCGTGCGATAATGACTTCTGTTCAACCACCCAAACG TCGGAGAGCCTGACGACGGATCAGCATTCCAAAAAGATCCCTTGGATCGTCTGGGTCGGC TATGGGATCCTCCCCTATAGTGAGAAACAGGTTCTTGCAAGCGCAAAACAATGTGTTCCC TGTCTTTGTCTGCTATGGGATCCTCCNTTATAGAGAGANNNNNNNTGNNNNNTANTTTCC NNATTTTATTGAATTNNNGAATGGTTAGCATCATATTGGTGTATTAGCAANATCTTCCAC AAAAAACTTATTGCAAGACTAAACAAACAGACAAGTCTTAGAATTAACGAAATGAATTAA GTTCTCTGATCTAACAAACTTTATAAAAATCCATTCAGGCAAAAATTTCCGAGAAATTTA CAGTGCCGTGTATTCAAACTTTCTCAAACTTTCCTTTTAATCCACACCCAAATTCCCCCA AAAGAACGGACAACTGCCCAATAAACTTATGGGATCCTCCCTATTTTGAGAAANANCAGA AAAGACATAACAATACCCAACACAGAATAAGCAAAACGAGCCACCGTATTAAACAAGAAT ACCAGAACTAAGAAAGAAAAGGGGCAGAGCGCTCACCATCAAGCCGGGAACGATAGACCG CGTGCGCCACAGCAGAAAGAGAGAAGATGAAAGA |
| GenBank Accession | BX290764 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:27710443 - go to primer design |
| BLAST e Value | 3e-54 |
| Hit Clone Code (BAC ID) | F25P22 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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