SimpleSearch - Line and FST details
Line specific information
| Line ID | 442C06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N442366) |
| Segregation Analysis | 50:7:4 |
| Confirmed for Hit | At1g76360 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g76360
| Sequence (A. th genome BLAST matches underlined) | >43-K024502-022-442-C06-8409 TTTACATTTTATATTAAGAAACATGTTTTAATTGTTATCGGTATTTTCCTTTGTCTATGG GATCCTCCCTATAGTGAGACCNANGNCNCCCNCNNNTCCCGAGTCCTGCCCACCCCCCGA CCCCCCACCTCCCCGGAGTCCCTATTTCCCGCAACTCCAGAGAGCCCCGGATCCCCCTCT CATTCCGGCGAAATTAAACCCGAAATCCTTAGAAAAACTATACTACTTCGGAAATCTTTA TATCAGCGCCTCGCTGCTCACCACCCCACAGGACCACAAAGAGAACGGTACCCAACCATG ACCAACGGCAACCACCCCCATAAAAGAAACCAAGGGGACCCCCCCTAAGGTGGGCATAGC GGACCCCCAGATCCACGCATGCAACCCGACTACCGAAGAAAAACACCTCAATAGAGTCAA AAGGCACACACACGCAAAACATCATCCACACACCTCGCGCACCCCGACAACACACACTGG ACCCATCAACTACCCCACATAACTTACACACAAGACAACATTAAAAA |
| GenBank Accession | BX943009 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:28643730 - go to primer design |
| BLAST e Value | 2e-20 |
| Hit Clone Code (BAC ID) | F15M4 |
| Hit Gene Code | At1g76360 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Protein kinase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g63740
| Sequence (A. th genome BLAST matches underlined) | >43-K024536-022-442-C06-8409 AACATGTTTTAATTGTTATCGGTATTTTCCTTTGGCTATGGGATCCTCCCAAGGGGGGGT CCTACTTCCCCTATATGATGAGGATTTGATGGACACTTATTGGGATCGACTCCCCCTCCT CTCTCATTTTCACATGACATAGAGTATTGGAATAACTGCATTTCCTCACAGAAGAACCCA ATTTTCCTTTTGAGTAAATTCCAATTTGGCCCAATATAATGGCCTATGGGATCCTCCCTA TAGTGAGATGTCTTAACCTATCTGTCCTGAGAACCTGTATAGATCCCCAACAAAATCAAC TAAAAGACATGCTCTATCACCACACACCCTGAACACACATATCGTCTTAGCAGAACCCGC ATCAAACCAACAAATAACTCCCAGTATCCGCTACTTCTATGATGCAGCTAACCTAGCCAC AAATCACACGCCTCAGTCCCCGCTCCCACCTCACTCAAGCATTCCACAAACACTTTATTA AAAACTTTACA |
| GenBank Accession | BX943010 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:25510568 - go to primer design |
| BLAST e Value | 4e-18 |
| Hit Clone Code (BAC ID) | MBK5 |
| Hit Gene Code | At5g63740 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RING/U-box superfamily protein |
| Insertion Classification | 3' region |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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