SimpleSearch - Line and FST details


Line specific information

 
Line ID 444B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N442549)
Segregation Analysis N/A (line seemingly not resistant, T2 plants grown without drug)
Confirmed for Hit At3g01100
Parent of DUPLO pair 12834
Parent of pair(s) none

Gene hit At3g01100

 
Sequence (A. th genome BLAST matches underlined) 
>66-K024528-022-444-B09-8409
GTAGTTTTGGCCAATAGTTCACAGCTATACTATCTTCTCTTTGGTACTAATGCACATTAT
TGCAGTCGGATTATTCGGGCTTAAAGAGCTTCCAGTGGCATCTTCTTTAACAATTCCCCT
TCCGGTTCTCACGGTCCTTTTCAGCATTTACTGCCAAAGACGGTTTTTACCAAATTTCAA
ATCTTATCCTACCCAGGTAAAGGCTTTAGAGAAATAGTTACTCATATTTTTGATCCAATG
GAAGAAAAATATGGCTATGGGATCCTCCCTATAGTGAGACNNATTANTCNNNNNN
GenBank Accession BX943187 [GenBank]
Graphic View Graphic view of gene At3g01100
Predicted Position of Insertion Chr3:35515 - go to primer design
BLAST e Value 3e-142
Hit Clone Code (BAC ID) T4P13
Hit Gene Code At3g01100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37