SimpleSearch - Line and FST details


Line specific information

 
Line ID 452B05
Vector Used pAC161
Line Availability available as T3 set from NASC (N443313)
Segregation Analysis 50:49:40
Confirmed for Hit At5g06180
Parent of DUPLO pair none
Parent of pair(s) 11979

Gene hit At5g06180

 
Sequence (A. th genome BLAST matches underlined) 
>34-K018811-022-452-B05-8409
TGATCTGTAGATTCCNGGACATGAGCATTTACAATTGAGCTCTGGTGAGGACACTCTGAT
AAAACCAGAGCAAGGTGCTATGGTGTCCTCCCGATAGAGAGACGTTTTCTTAAACATACC
CGGTACTACATGCCTCGCTCAACATACTTATAGAGTCAGCAGTTATGATAAAAGTATTGG
CTAAAGCTATGGGATCCTCCCTATAGTGAGANNNNNNNNNANNGNNNNNNNCNNNNTTTT
TTTTTTTTCTAAAGTGTAGATGTCCTCANAGTAATTATAAANANNNNNNNNNNTNNNNNN
TNTTTNTNNNTNTTTTTTTTNNNTAAATTNNATNTTTTTANNTAAANANAATATTTTTTT
TTTTTTATAAAAATCCCCCCCCCCCCTTACTTTCACCTTTCCTTTCCCCTTTCTCATCAT
CCAACAAAAAACAACAAAA
GenBank Accession BX292189 [GenBank]
Graphic View Graphic view of gene At5g06180
Predicted Position of Insertion Chr5:1874995 - go to primer design
BLAST e Value 1e-41
Hit Clone Code (BAC ID) MBL20
Hit Gene Code At5g06180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation fission ELM1-like protein (DUF1022)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37