SimpleSearch - Line and FST details


Line specific information

 
Line ID 453B02
Vector Used pAC161
Line Availability available as T3 set from NASC (N443406)
Segregation Analysis 49:48:35
Confirmed for Hit MIJ24
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At1g17460

 
Sequence (A. th genome BLAST matches underlined) 
>10-K018812-022-453-B02-8409
TAATGATAGCAAACTGATTGGCGGAGATCAAGATGCGATTGATGCTTTTAGCAAGGGTAC
ATAATATGAACAAACAGCTACTGAAAGCATAGATGCACCAGCTATGGGAATCCTCCCTAT
AATGAGAGTTTCTTAAAATAATTTTTGTCAATATAGATGTTATTTTCCTATAAAAATCCA
TGCATGACGTTAACAAAGGCTATGGGATCCTCCCTATAATGAG
GenBank Accession BX292290 [GenBank]
Graphic View Graphic view of gene At1g17460
Predicted Position of Insertion Chr1:6000839 - go to primer design
BLAST e Value 4e-35
Hit Clone Code (BAC ID) F1L3
Hit Gene Code At1g17460 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TRF-like 3
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 406G11

Gene hit MIJ24

 
Sequence (A. th genome BLAST matches underlined) 
>10-K018814-022-453-B02-8409
TATCATGAAATTTCCCGGACATGAAGCCATTTACAATTGGGGATCTCAAGAAGATCCTTT
GATCTTTTACTACGGGGTATGACATTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTATGGGATCCTCCCTATAGTGAGATTAGGAT
ATAATAAAGTCAGATGTTTTAAAAAGAAGAGTTTTCTATGAATTCCTGTTTCTTAAAATA
ATTTTTGTCAATATAGATGTTATTTTCCTATAAAAATCCATGCATGACGTTAACAAAGAC
TATGGGATCCTCCCTATAATGAG
GenBank Accession BX292291 [GenBank]
Graphic View Graphic view of sequence BX292291 of line 453B02
Predicted Position of Insertion Chr5:15850190 - go to primer design
BLAST e Value 8e-67
Hit Clone Code (BAC ID) MIJ24
Insertion Classification Genome Hit
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37