SimpleSearch - Line and FST details


Line specific information

 
Line ID 456A07
Vector Used pAC161
Line Availability available as T3 set from NASC (N443687)
Segregation Analysis 50:15:15
Confirmed for Hit At3g06150
Parent of DUPLO pair 11752
Parent of pair(s) none

Gene hit At3g06150

 
Sequence (A. th genome BLAST matches underlined) 
>49-K018777w-022-456-A07-8409
ATTGATATATCCTGACACAATCGCGACAGGCGGGTACGCGAGAATGCTATGGGATCCTCC
CTATAGTGAGAAAACTCGGAAAGACCGAAGACCACAACCTCTACTGACAATAGCAGTGTC
ATGCAAACGCCAGTATCGATGCTCCTCTGCAACTCCTGTAATAAGGAACAAAACAGAGCA
GATAAAGACCATGTAAGTCTTTAATTTTTATTATTTTCTATGGGATCCTCCCTATAGTGA
GATAACAGTCTCCGAAGGGTTCTTCGGATTCTAAAACTTCATATCGAACCTCCTCGGGAC
AGCGGGGATTTCAGGATGACCCAAGACGAAATTCAGCAAGTTTCTGATCGAATCAACATG
ATTCGAATCTCCCCAGAAGAAAATCCATTTGCCTTTCAAGCAATCCCAAGCCTTTTCCGC
AGAGAAGAGCTTGAAAGAGCAATGGCTATGGGATCCTCCCTATAAT
GenBank Accession BX292686 [GenBank]
Graphic View Graphic view of gene At3g06150
Predicted Position of Insertion Chr3:1862328 - go to primer design
BLAST e Value 2e-110
Hit Clone Code (BAC ID) F28L1
Hit Gene Code At3g06150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g16220

 
Sequence (A. th genome BLAST matches underlined) 
>49-K018779-022-456-A07-8409
TGATCTGAGATTTCCNGGACATGAAGCCATTTAACCGATTTTTATGTCATCAATGGAAAG
AAAACCAATCATGAAATGAAAATCAGTGATTCTTTGTTAATTTGATCATTTATGAGTTTT
GTTGACTCACAACCATTTTCTCCAGCTACTTGATCTTAGCTCGCCAGAGAAGAACCTATG
GGATCTCCCCCTATAGTGAG
GenBank Accession BX292687 [GenBank]
Graphic View Graphic view of gene At1g16220
Predicted Position of Insertion Chr1:5550646 - go to primer design
BLAST e Value 2e-76
Hit Clone Code (BAC ID) F3O9
Hit Gene Code At1g16220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein phosphatase 2C family protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37