SimpleSearch - Line and FST details


Line specific information

 
Line ID 456E05
Vector Used pAC161
Line Availability available as T3 set from NASC (N443733)
Segregation Analysis 50:29:19
Confirmed for Hit At5g27750
Parent of DUPLO pair none
Parent of pair(s) 9570, 97505, 97517, 97518

Gene hit At5g27750

 
Sequence (A. th genome BLAST matches underlined) 
>37-K018777w-022-456-E05-8409
TGATCTGAAATTTCCCGGACATGAAGCATTTACATGATGTGTGTAGCGCCCTGATATCTC
TAAGCAGTAGCGCGGCTATGCCTACGACATCTATATTAGAGATGATGGTCCTTGGCTATG
GCATGCCCTCTATAACAGGACATCCAGAGACAAGCTTCTCAAGACTCATGGTACCAGACC
ATCGAACTTCACGAAGAATCATGAACTTAAGACAAGGCATAGAAAGCAAACCCGGATCGT
TAAGAGCCGAATCCCGGAGCTTTAAAGTAACCAACGTCTTGCTTGTAAAGAGATTCAGAG
GCATGAACTCCAAATAAGGATACATAATGCATTCCTCCTCCCAATACATGGTACTACTCA
CAGCATCTATGGGATCCTCCCTAATAGTGAGANNGNNANNNNNNNNNNNNNNTNNNNNNN
NNTTGTTTTCNTNNNANGTTGTNNGGTTCCTACNNCTGTGTTGATAGNGTGTCTTTGGGC
CTTTGGTCTTCGTGAGACTGCATCTTTGATAATTTTTGGAGTAGACAAGCGTGTCGTGCT
CCACCATGTTGACGAAGATTTTCTTCTTGTCATTGAGTCGTAAGAGACTCTGGTATGAAC
TGTTCGCCAGTCTTTACGGCGAGTTCTGGTAGGGCCTCTATTTGAATCTTTGACTCCATG
GGAATTGGGGATCCTCTA
GenBank Accession BX292749 [GenBank]
Graphic View Graphic view of gene At5g27750
Predicted Position of Insertion Chr5:9829071 - go to primer design
BLAST e Value 1e-130
Hit Clone Code (BAC ID) T1G16
Hit Gene Code At5g27750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/FBD-like domains containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX292749 [GenBank]


Last Updated on 10.06.2021 13:37