SimpleSearch - Line and FST details


Line specific information

 
Line ID 465G01
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 11725
Note

Gene hit At2g02070

 
Sequence (A. th genome BLAST matches underlined) 
>07-K018987-022-464-G01-8409
ACCAGATGCGAGCTATGGGATCCTCCCTATACTAAGACTCTTGAGCCAAAGCGTCACACA
AAGCTCTATGTGTGATGAAACTGTCTCGCCTGTGACACAAAATAAAATAAATAAAAATCA
ATTTCACAATGGAATCTATTGGATCGTCAGATATATCTCTATACTATTCATATAAAATGA
TGAAATAAAAGACATATTTTGGGAAAAGTGAAAGAAAAAAAATATAAATGTAAGTAGAGA
GAGAGACTCATCATGTCACGTAGCTACAAATAGATTCGCGTGTAATTATGGGATCTTGAA
AAGTAGATAGATGGCTATGGGATCCTCCCTATAATAAAANATNAGGCGCACGATTAACNA
TATCCACATGCAAAAATTAAATACGCATTATGCAGTTATATACACATGTGGGGGCATTCC
TTAACATTTAAAATGTGTAATATGTGCACTCCGATATTTTGAATTTATTATACAAAATTA
GACGCCCAACCAAAATTAACAAAACAAAAAGGGTGTTAAAGGTATCATTTACGTGATAAC
GCCCCATTGGCAAATAACAGGAAAGTGATTGAAAAGGATCCCCTATTAAGTACCCCCCAT
AAGGGGAAAAATAATGGCGTTTATAAATTAAAAAAAGGGTTTAAAGAAAAAGGTTAAACC
GCCAATATGATACGTCCTTTTTTGCGGGCCCTTTAATCTTACAAAACAAAACAATGG
GenBank Accession BX291557 [GenBank]
Graphic View Graphic view of gene At2g02070
Predicted Position of Insertion Chr2:508019 - go to primer design
BLAST e Value 5e-102
Hit Clone Code (BAC ID) F5O4
Hit Gene Code At2g02070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation indeterminate(ID)-domain 5
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 458G01

Gene hit At5g63070

 
Sequence (A. th genome BLAST matches underlined) 
>07-K018954-022-464-G01-8409
TGATCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATTGATGATATTTCAAC
GATTAGATTACATGGTTGGTAACAGCCATAATTAGATTACAAGATTAGTAACATTAAATA
ATTGATAATATTTCAAAAATATTTACATTTACTCGGTCAATCTTTAACATTTAGGTAAGT
TTTCGATATTTCCGACGATCCTATGGGATCCTCCCCTATAGTGAGANCCGANANGNNNNT
GCTTTTGCCTGTTCGTCATGTATAGGATATCGGAACCGATCGGACCATCGGAAAAAAAGA
AACTGATTGGGATTGTTATTGGGGGAAAAATTAAACTCTTATTACTGCAAAAGAAGGAAT
AAAAAATATGCGGCTTATCCGGGTGTGGTAATATTTTGGAAGGATACAGAATGTGAGCAT
TCTCACAGTTGAATGTCAGAAACTATCATGCGTTTATTGATGCCTTCCTCTGGGGTCGGG
CGCACTAGGAAATCGAAGAACTGACAATTGATGGAGGCAAGTGTTGAGCTCCCTA
GenBank Accession BX291556 [GenBank]
Graphic View Graphic view of gene At5g63070
Predicted Position of Insertion Chr5:25299926 - go to primer design
BLAST e Value 8e-70
Hit Clone Code (BAC ID) MJH22
Hit Gene Code At5g63070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein S19 family protein
Insertion Classification Promoter
Confirmation Status failed, line belongs to a contamination group, please check line 457F03


Last Updated on 10.06.2021 13:37