SimpleSearch - Line and FST details


Line specific information

 
Line ID 471E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N445178)
Segregation Analysis 50:30:23
Confirmed for Hit At2g39700
Parent of DUPLO pair none
Parent of pair(s) 268, 6467, 6469, 6484, 6503, 6513, 8878, 8880, 10667, 10673, 90711, 90726, 90754, 90767, 90786, 90798, 90809, 90819, 90838, 90839, 90840, 90841, 90842

Gene hit At2g39700

 
Sequence (A. th genome BLAST matches underlined) 
>77-K019878-022-471-E10-8409
CTGATATTGCGAATGATATTGAGCATACATATAATTTTTTAGTATAGAGCTTTCTATTAA
AAGTCATTTTTAACAAAATGAGTTTAATTCATTACAGGAGGAGCTTGTGGTTACGGTAAC
CTATACAGCCAAGGGTACGGGACCAACACGGCTGCTTTGAGTACGGCGCTGTTTAACAAT
GGTATGAGTTGTGGAGCCTGCTTTGAGCTAAAATGCGCCAACGACCCTCAATGGTGTCAC
TCAGGTAGTCCTTCGATCCTCATCACCGCAACCAATTTCTGCCCACCAAACTTGGCTCAG
CCTATGGGATCCTCCCTTAATAGTGAGAGCTATGGNATCCTCCCTATANTGGGCTACACT
GAATTGGTAGCTCCCATTTGGACGTGAATGTAGACACGCTATAATATCCATTCTCTAGTG
AGAATAATTTGTTTATTGCTTTCGCCTATAAATACGACGGATCGNAATTTGTCGTTTTAT
CAAAATGTACTTTCATTTTATAATAACGCTGCCGACATCTACATTTTTGAATTGAAAAAC
AAATGGTAATAACTCTTTCTTTTTCTCCCTATTGACCATCATACTCATTGCTGA
GenBank Accession BX531046 [GenBank]
Graphic View Graphic view of gene At2g39700
Predicted Position of Insertion Chr2:16545271 - go to primer design
BLAST e Value 4e-152
Hit Clone Code (BAC ID) F17A14
Hit Gene Code At2g39700 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation expansin A4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX531047 [GenBank]


Last Updated on 10.06.2021 13:37