SimpleSearch - Line and FST details


Line specific information

 
Line ID 486G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N446635)
Segregation Analysis 50:17:13
Confirmed for Hit At4g29610
Parent of DUPLO pair none
Parent of pair(s) 4897, 10131, 11284, 86044
Note

Gene hit At5g05120

 
Sequence (A. th genome BLAST matches underlined) 
>23-K019564-022-486-G03-8409
GGGATTTGAACAGCCTCAGTACAAAGTTGATAGATCATACAAGATGTCCATGGTCTACAA
CCAATATGTGGGATCCTCAAGCCCTATGGGATCCTCCCTATAGTGAGANNCCNNGGNNNN
GCTCCNCCCATCCNNTACCCCCCGGCGGGACNGCGGGCGGGGGCGGCACTTGCCGCGCCA
CACCCGCCAGAACCCATTTACCACTCCCCAGCCGCGTGCCACCCTGTCCGCCGGCCTTTA
TTTTTTTTTTGTAGACGCGAGGGGCGGGGGAGGCTACAATCCCAGCTCCGCGTCGATCAG
GAACAGAGCAAAACCAGGCCGACATGATAGTACGTGGCCTAGCGGGGAGGGGTGGGAGGG
CCGGAGGCCGGAAGGGACGGGGAGAGGGAGGAGGGGTAGTAGGGCGATAAACGCAGAAAC
AAAGCGCCGCGGAGGAGCGAACGGGGAAGAAGTTGGTGAAGCGCGGATCGGCCCGGTAGG
AAGTGAACCATCACTAAAACATACCAGAGTCACTGAACACGAACCGGGAATCAGATGAGA
AGAAAAGTTCGAACGCAACCGCCCAAGAGGTAAGAGGAGAAACCGAGATATCACAACCAC
ACACGATGTGGAAAATATGTATATCGCCGACCTAAGAAGACCGTATTTATCTACCGCACC
GCCACACAATAAAGCCGCGAACCGCCCGACAACCGGAAACATGAATAACACGACCGAAAA
TTATCAGCAATATATTATACGCCGCTACCCGACTAATATAAGTAATTAACGAGTGCAGTA
TTATCACAACCCAATTTACATCCCGTACATTTATATACCACCACAGCGTCATGATATAAT
CAGCACGCAAACCAATTTTTGACACATC
GenBank Accession BX532069 [GenBank]
Graphic View Graphic view of gene At5g05120
Predicted Position of Insertion Chr5:1511429 - go to primer design
BLAST e Value 1e-38
Hit Clone Code (BAC ID) MUG13
Hit Gene Code At5g05120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation C2H2 and C2HC zinc fingers superfamily protein
Insertion Classification CDSi
Confirmation Status failed
Other FSTs Supporting this Hit FR811007 [GenBank]

Gene hit At4g29610

 
Sequence (A. th genome BLAST matches underlined) 
>23-K026179-022-486-G03-8409
TTTTGTATCTTGTGATCAAGATTTCGATTTCAGGAGCGTTGCGCATTTCTTGATAAAACT
GGCGGCAGTGGCCACATGGTGCACCGAAGATGGTGCCGGTGACGGAGACAGCTATATGAG
TGAGCTTTTTCATGGAGTTGAGAGCGAGGTTGGTGACGAGGAACTGCTCGGCGTGGATGG
TGTGGTGAAGAGGGAGATTTGGGAACTCGACATTGACGCCTAAGAAGACTTCGCCCGATG
ATGTGAGTCCAACTGCTCCGACTTTGAATGTGGAGACTGGAGCCCGAGCGAGTGACATAG
CCTTGTCGATCAGCTTTGGAAGGTCCGAGGGTCCGCGGACGCCCTCCTCTGCTGCTTCGC
TGGGAGTGTAAACGAACTTCATTTTCTTAATTTGTATCTACCTCAAGTGTTTATGTCAAT
GAGATTTTTTATATATAACACGCTTTCAAAGAAA
GenBank Accession CR397688 [GenBank]
Graphic View Graphic view of gene At4g29610
Predicted Position of Insertion Chr4:14517881 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T16L4
Hit Gene Code At4g29610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cytidine/deoxycytidylate deaminase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR811008 [GenBank]


Last Updated on 10.06.2021 13:37