SimpleSearch - Line and FST details


Line specific information

 
Line ID 495F01
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F17A22

 
Sequence (A. th genome BLAST matches underlined) 
>06-K019627-022-495-F01-8409
ATTGCATATAGACCAAGCATAATTATTACCGATTGTTCCACAATTGAAGAAAGAAACGAG
TATTTGTAACTTGTCACCCCTCGTATTATTATTTATTTTGTATGACTTTGGAGTAGTATA
ATTAATTATCAAATACTATTATTAGCTTGACCTATGGGATCCTCCCTATAGTGAGACCAA
CAGGCACCTCCCTTTGACCGGCGCGTGAAACCAGCATCCACCTCTCGGCTCAAGATTCGC
GTCCAAGAAAATATCGAGAACCGATGATTACTTGGAAAGTGGACCATTTCCTACAAAATC
AAAGATTAAAAAAGGAACGTAGCTCATGCGAATAGTTTAGTCCACCAAAGTGAAATGGTA
GAACATTTGGTTTCAGTTTAGTTGTGTGTATTTTTATTAAAGGCTTCAGAATCAATTTCG
ATTTTTGAAAAATGAGTTTTTATAGCCATGTTAGTATGTTACGAGGATGGAAAAGCAACC
TATGGGATCCTCCCCATAGTGAG
GenBank Accession BX532870 [GenBank]
Graphic View Graphic view of sequence BX532870 of line 495F01
Predicted Position of Insertion Chr2:19606792 - go to primer design
BLAST e Value 5e-142
Hit Clone Code (BAC ID) F17A22
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g02590

 
Sequence (A. th genome BLAST matches underlined) 
>06-K019654-022-495-F01-8409
AGATCATGTAGATTTCCGGACTGAAGCCGTTTACACTGACCATATAAGCGGTATACTTAT
TACCGATTGTTTAAATTGACGAAAAAACAAGTATTTGTAATTTGTCACCCCTTGTATTAT
TATTTATTTTGTATGACTTTGGAGTAGTATAATTAATTATCAAATAATATTATTAGTTTG
ATCTATGGGATCTCCCCTATAGTGAGAC
GenBank Accession BX532871 [GenBank]
Graphic View Graphic view of gene At4g02590
Predicted Position of Insertion Chr4:1137626 - go to primer design
BLAST e Value 2e-55
Hit Clone Code (BAC ID) T10P11
Hit Gene Code At4g02590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37