SimpleSearch - Line and FST details


Line specific information

 
Line ID 496C08
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 8032
Note

Gene hit F16M2

 
Sequence (A. th genome BLAST matches underlined) 
>59-K019628-022-496-C08-8409
GGACATGAGCATTCCTAAGTTTGAAACTTAATTATGTTATTTTTCTGGTCAAGACATGTA
TGATTCTATCAATAACACACATGAAAAGAAAAAAAAATATATTTGTTTTAATAACCGAAT
CATATACTAAACCTATGGGATCCTCCCTATAGGGAGACTTACAATGCTCTTAACCCAGAC
CGGATTCGGAATCCCTATGGGATCCTCCCTATAGTGAGATAATCAGATCCTCTGGATGTT
GCTCTACCGCGAATATACGACGGTTGCTTGCTCGTGTCTGTATGAAGAAGCACTTTCTTT
TTACTATATC
GenBank Accession BX532940 [GenBank]
Graphic View Graphic view of sequence BX532940 of line 496C08
Predicted Position of Insertion Chr3:23363635 - go to primer design
BLAST e Value 2e-42
Hit Clone Code (BAC ID) F16M2
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g19320

 
Sequence (A. th genome BLAST matches underlined) 
>59-K019655-022-496-C08-8409
AATGTGCCAAGTTTTTCTTAGCGGAACAGAGTTGTCCTAACTTTAAGTCTTTCTTTTATC
TCCCTTGTGGCAAAGATCCCCACCGGATTAAACCGGATCAAGAAGGATCAGACGGTCAGG
CTTCGCCACCGGTATCTTACAATGCTCTTAACCCAGACCGGATTCGGAATCTCTATGGGA
TCCTCNCCTATAGTGAGA
GenBank Accession BX532941 [GenBank]
Graphic View Graphic view of gene At3g19320
Predicted Position of Insertion Chr3:6696570 - go to primer design
BLAST e Value 6e-83
Hit Clone Code (BAC ID) MLD14
Hit Gene Code At3g19320 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat (LRR) family protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37