SimpleSearch - Line and FST details


Line specific information

 
Line ID 500F01
Vector Used pGABI1
Line Availability available as T3 set from NASC (N447965)
Segregation Analysis 50:42:33
Confirmed for Hit At3g48010
Parent of DUPLO pair none
Parent of pair(s) 6284, 6298, 7800, 8860, 81613, 81639, 81656, 81659, 81660

Gene hit At3g48010

 
Sequence (A. th genome BLAST matches underlined) 
>06-K019570-022-500-F01-CR3S
TGATTTGTATTTGTACTACTTCTATCATGGAATTTCTAATTCCTAAAGCCACATATCAGG
GGCGTATGGTATCCTTCCTATAGCGAGCCTTCATTCACTATTCAATTTTATATACAAATA
TTTCAACGACAGCAAGGATTTGACACACTATATGTGTGAGATCCTCCTTATAATGAGAGT
CTCCATACTCCCCATATAATAGTCGTCTTCTTCCTCTTGCCTAGCTAACTCCATTGCTAA
TTTCCTCTTCATGTATCGCCTCCAAGCAGCTTGTATAAAACAAGTTCCCCATGCTCTCCA
TTGATGCGAATAGTATCTGGTTACAGTCAAAACATAAAGATCAAGAAACCTTATAGCGTG
TGAAGCAAGAAACCTATATTGCTTATGAGACCATACGAGGATTACCTGAAAGCATGTTGG
AGTTTCTTGCTGTGAAGACGTCTGAATTGGTTAGCTACGAATTTCAAGTCCTCTGCTCGG
AGAGCGAAAGCTTCTACTTCGGAGAGAGTCCTTACGGTTCTCGTGGACAATGGTAGATTA
TGATTAATGTTTGGCACTAAAGCCCAGGTTAAAAGCTCTTCACCGCAGAAATCTCCTGGT
CTAAGTGTGATAGAGTTAAAGAATCCTGACCGTCCCACATCTGTAGTTGAACTCTCCATC
TGACCTCTAATAATGAAAAGCATCTCGGTTACAGGATCGCCTTCGCGTATAACATAGGTG
TCTTTTGTGGTCAAGGACGGAACTAAACGCCTCAATATCGCATCCAAAAGCTGGCCATCC
ATTTGCCCAAGAACCGGCCCCTGAAAATTAAAGAACCGTAAATTAGGGTTTCTTACTTGA
AGGGACGCAATGGAAATGGGGTGT
GenBank Accession BX537055 [GenBank]
Graphic View Graphic view of gene At3g48010
Predicted Position of Insertion Chr3:17721469 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T17F15
Hit Gene Code At3g48010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cyclic nucleotide-gated channel 16
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX533398 [GenBank] BX533399 [GenBank] BX533399 [GenBank] BX537052 [GenBank] BX537054 [GenBank] BX537055 [GenBank]


Last Updated on 10.06.2021 13:37