SimpleSearch - Line and FST details
Line specific information
| Line ID | 506B03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N448495) |
| Segregation Analysis | 50:38:37 |
| Confirmed for Hit | At2g42600 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3143, 3358 |
Gene hit At2g42600
| Sequence (A. th genome BLAST matches underlined) | >18-K019732-022-506-B03-8409 CAAACCAAAAAAAATAAGATCTCTGTCCTTTACATTAACCAATAAACTAAATTGCTGTGA TGTGAATTAAATTTTTGCTACCTCAAACATAAGATCTTCTATCTGGGAGAAGTAGAGATT AGCAGCCATCATTCTATGGGATCCTCCCCTATAGTGAGAGGAAGGGAACCGCCCTATAGC GAGGGTATGGGATCGTCCCCACGGCGAGGTACCCCGAT |
| GenBank Accession | BX534033 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:17737038 - go to primer design |
| BLAST e Value | 8e-58 |
| Hit Clone Code (BAC ID) | F14N22 |
| Hit Gene Code | At2g42600 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | phosphoenolpyruvate carboxylase 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g55340
| Sequence (A. th genome BLAST matches underlined) | >18-K019739-022-506-B03-8409 GAGCATTTACATTGAAGTTACTAGAACCATTCATGTTTAGCTCACACCAAAAAAAATAGG ATCTCTGTCCTTTACATTAACCAATAAACTAAATTGCTGTGATGTGAATTAAATTTTTGC TACCTCAAACATAGAGATCTTCTATCTGGGAGAAGTAGAGATTAGCAGCCATCATCCTAT GGGATCCTCNCCTATAGGGAGAAGTATCTTCCATGTTGTACGAACCAGCATTGTTCGTTT CACCAGGTGTATGATCAGTAGCTGGTCTGTCTTTAAGTGCACAACATATCTTGACAGGTC TTCCGCAAATAACCTGCTGATCCAGCTTCAGCGCAATCGCCACAGACACACTATCCTTGA AATCCACATGCGCATACCCTTTAAACTCTCCTGTTTCTTTGTTTTTACCCAACCGCACAG AGTTTATTACGCAGTCAGAGAAGAGCTTCCGTATGTCACGCTCTGTTGTGTCCCAGGCTA AATTCCCAATGTATACCCTGTTATAGCCATCCACCATTTCTGGAGCGAAACCAGAAGATG TTTTCCTTCTTGGAATGGAAGGGGGGGGGTGGTTTTCACGTATTGGTGGATTGCCAAATA TTGATCACCCC |
| GenBank Accession | BX534034 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:20517286 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T26I12 |
| Hit Gene Code | At3g55340 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | phragmoplastin interacting protein 1 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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