SimpleSearch - Line and FST details


Line specific information

 
Line ID 508H09
Vector Used pAC161
Line Availability available as T3 set from NASC (N448765)
Segregation Analysis 50:41:33
Confirmed for Hit At3g15830
Parent of DUPLO pair none
Parent of pair(s) 12220

Gene hit At3g15830

 
Sequence (A. th genome BLAST matches underlined) 
>72-K019518-022-508-H09-8409
CGAGGGCGTCCTTCCACTGCCCATGCACATCCAATATACGTTGTTTGCAGTCCCTACCAA
AATCTGTCCACACCCCCAACCAAAACAATTGATTAAAAAAAATGCAAAATTAAGTCGAAT
TTAACTATGGGATCCTCCCTATAGTGAGATTATGGGATCCTCCCAATCTTGGGCCTATGT
GATCCTACATGAGATCGAGGTGTCTCGATCGGCTAACACTCTGTTAAGATTGGGTGTCTA
TGCCCAGATGCTATGCTCATAACGTGTGGCCACTATTCCTATGGGATCCTCCCTATAGTG
AGATTTATTTTTTTTTTCCCCCCCCCCCCCCGGGACAATATTTTTTTAAAAGAACGATTA
AGGCACTTATTAAAAAAAAAAAAAAAGAGTGGGGGGGGGGGGGAGCANATTATCCGGNCG
GAAACGTGTCGTTCTTCCTCTTCTACTCAGGGCACGTCGCCGGATCGATGATCGCATCGG
TGGACATGAAGAGAATGCAGAGGTTTAGGCTGGCGATGGCTTTTGACATTCTCAATGGAT
TGCAATCCATCAGGCTGCTTGGCACGAGGGGAACTACCCCNATTGATATTGCGGGTGGAG
TTGGAGCTGGGATTCTCTTTGACTCATTGGCCGGGAAGTACGAAGAGATGAGCAAGAGAA
ATGGACGGAGTACTCG
GenBank Accession BX534387 [GenBank]
Graphic View Graphic view of gene At3g15830
Predicted Position of Insertion Chr3:5355609 - go to primer design
BLAST e Value 3e-106
Hit Clone Code (BAC ID) MSJ11
Hit Gene Code At3g15830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phosphatidic acid phosphatase-related / PAP2-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX534388 [GenBank]


Last Updated on 10.06.2021 13:37